Transcript Information: R_Transcript_182290.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.36515305071823
Replicate 30.39837804515048
Condition 2: 8 Hour
Replicate 10.63876169427596
Replicate 20.58332735237875
Replicate 31.2627207388095
Condition 3: 24 Hour
Replicate 10.59889931898359
Replicate 20.38356971983613
Replicate 30.19032786684258


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_182290.p2 GENE.R_Transcript_182290~~R_Transcript_182290.p2 ORF type:5prime_partial len:115 (+),score=14.82,RVT_1|PF00078.23|2.3e-18 R_Transcript_182290:1-345(+)
CTTGATTTTGAGAAGGCTTATGATAGAGTCCGTTGGACTTTCCTTGATCGGGTACTACAACGGAAGGGGTTTGGGGAGAAATGGAGACAGTGGGTTAGGGGTTGTTTATCTAATACTGTGTTTTCTGTGTTGGTGAATGGGGCGCCGAGGGAGTGGTTCTCTTCCTCTCGAGGTTTGAGACAAGGGGACCCCTTGTCCCCTGTTCTGTTTACTCAGGTGGCGGACATCCTTAGTAGGTTGTTGGATAGGGCGGTGGACAGAGGCTTGGTGGAAGGCTTTGTTGTGGAAGGGAGGGTCTGCGTGTCTCACACTTGTTGTTTGCAGATGATGCTATTTTGTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_182290.p2 GENE.R_Transcript_182290~~R_Transcript_182290.p2 ORF type:5prime_partial len:115 (+),score=14.82,RVT_1|PF00078.23|2.3e-18 R_Transcript_182290:1-345(+)
LDFEKAYDRVRWTFLDRVLQRKGFGEKWRQWVRGCLSNTVFSVLVNGAPREWFSSSRGLRQGDPLSPVLFTQVADILSRLLDRAVDRGLVEGFVVEGRVCVSHTCCLQMMLFCF*

Click here to download the sequence:
Link to NCBI Protein BLAST