Transcript Information: R_Transcript_18231.p1


Annotated TAIR IDAT1G43760.1
Annotated Gene NameDNAse I-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16528880-16531065 | Reverse length=626
E-Value2E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.016473791475378
Replicate 20.11369837770558
Replicate 30
Condition 2: 8 Hour
Replicate 10.11049578044786
Replicate 20.10090650650355
Replicate 30.016382320054501
Condition 3: 24 Hour
Replicate 10
Replicate 20.059716404938386
Replicate 30.039508492214616


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18231.p1 GENE.R_Transcript_18231~~R_Transcript_18231.p1 ORF type:complete len:1108 (-),score=181.40,RVT_1|PF00078.23|8.2e-50,zf-RVT|PF13966.2|1.2e+03,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|6e-14,Exo_endo_phos|PF03372.19|3e-11 R_Transcript_18231:328-3651(-)
ATGAAGATCCTGACATGGAACATCAGGGGGCTTTGCTCTCCCCCAAAACAAATGCAGCTTAGGAAAATTCAAAAAAATTTGAATGTGGAAATGCTATGCTTACAAGAGACTCACATGAATGTACATAGCTGGCATGACTTTGTACATAAGTATTTTGCAGGCTGGTCACAAACAAACAATTTTCAACTCAATGACAATGGAAGGATTGGTCTTTTATGGGATACTAAGAAGGTGGATATTCACATAATGCTGATTGATGAGCAAGCAATTACTATCAAGGCTTCACATCTTGTTTATGGCACGGTTTATATGATCACCTGTGTATATGGATATTATTCTAATGGTGATAGATTGGACCTTTGGAACCATATTGCTCAGGTCTCTTCTACTAATGATCCTTGGATGATTTTTGGTGACTTCAATTGTGTACTTGATATGAATGATCGGATTGGTAGGCCAATAACAGCACATGAAGTGAGAGATTTTCAAGAATGTTGTATGATGAATGACTTGGCACAAGCTACTACCCATGGCTGCAAATATACATTCCAGAGAGCAGGTGTTCAATCAAGAATTGACAGGCTGTTAGTTAATGACAAATGGGCTGGGATCAACCTACACCCCATTATTGAGTTCTTCCCTCCGGGACAATACTCAGATCATTGCATGGGGATCATTGGGATACACAGGCAGAACATCAGGAAGAAAACTTTCAGATTCTACAATATGTGGGCTGAACATGCTGACTTCTTGAAGACAGTTGAAAGAAATTGGCATAAGGATCAATCTGGCTATAAGCAATATCAACTGTGCAAGAAGATGAGCCAAACTAAACAGGGTATGCTCGTACTCAACAAGGATCAATTCTCTAGAATCTTTGATAGAGCAGAAAGGGCAGAAGAGGAGCTCAAGAAGGCTCAAGAAAAGATTTTCAATGGATCAAATGATGCTACACTCTTGGCTGAGGTTCAGCAATTGGTTTTGAAAGCAAAAAATGCAAAACAGGCTGTGATGTCCTTCTCTTCTCAACGAGCTAAGAGGGATTTCTTTGCTTGGGCTGATAAGCCTACCAGGTTCTTCCATGATTTCATATCAAGGAGCAAAACAAACAACTTCATTGCAAGGATCAGGAAACAGGATGGTACATTCACTACCTCACAGCAACAGATTGTAGAGGAGTTTGTAAAATTTTTTGAGGGTCTAATGGGAACGCAGGTGGAGGTCCAACCAATTGACCCTAATATTGTACATAGTGGGAGATGTGTGTCAGTTCTAGAGGCCCAAGCACTCACTGTTGGGGTGACTGATGAAGAGATAAGAAATGCTCTATGGGATATAGAGGATCTCAAAGCACCAGGTATGGATGGTTTTACTGCAAAATTCTTCAAAAGAGCATGGGAGATTGTGGGAGAGGATGTAACCAGAGCAGTTCAGGAGTTCTTTAGCACGGGGAAACTGCTGAAACAACTTAACCATGCTATCATTTCATTGATACCAAAATGTGATAATGCTGAGGAAGTGGCCAATTATAGACCAATCTCATGTGTCTCGGTGGTATACAAGATCATTGCCAAGATAATTGCTAACAGAATGTGTGGTGTGATACCAAATATTGTTGATGGTACACAGTCAGCTTTTATCCCGGGGAGACATCTCTTGGATCATGTCCTACTGTTGCAAGAAATACTCAAGGATTACAACAGGAAAAGGGTTCCACCCTGCTGCCTGATCAAGGTTGATCTTAAGAAGGCATATGACACCATCTCATGGGACTTCTTATCTCAAATGCTTTCTTCACTGGGTTTTCCATGTAAATTCATTGGATGGATAATGGAATGTGTTTCAAACACTTCTTTCTCCATCAGAGTTAATGGGGAGATTCATGGCTATTTTAAGGGTGCTAGGGGTCTGAGACAAGGTGACCCCATGTCACCATACCTGTTTACCCTGTGTATGGAATACCTCACCAGACTCATGAATACAGAGACAAATACAGAGGGGTTTGGGTTTCACTCAAGATGCAGCAGACTGAAGCTGACTCACCTCATTTATGCTGATGACTTAATTATGTTTTGCAAGGGGAATACAACATCGGTCCAAAGTATGAAGCGTACCCTGGATATGTTCTCCAGGACCTCGGGTCTCAACATCAACAACCTCAAATCTGATGTTATTTTTGCTGGAGTGAATTTACAGATGAAGGAGCAGTTGCTGGAGGTTTTAGCCATGCGCCAAGGAGCCCTTCCTTTTAGGTACTTGGGTATCCCCCTCAACCCTGCCAAGCTCAAGAATGTCCATTTCTCACCATTGATCACACAGATTAAGGAAGTCATTTCTGGGTGGAAAACTAAATCTCTATCTTATGCGGGGAGAATTGAGCTGCTTAAGTCTGGTATTCAGGGTATATTGGGTTTCTGGTTTAATACTATATTTGTACCTATGGGAGTCATTGATGAAATCATTTCCATATGTCGGAAATTTTTATGGAATGGGAGGAAACCACTCATAGCATGGAAGGACCTATCAAAACCGAAAGAAGAGGGGGGTGTGGGTCTTAAAGATTGGAGAGAATGGAACAAAGCTTTGTTGGCCAGACAGATTCACAAGCTTCTGAATGGAGGGGACAGCCTTTGGTGCAAATGGGTTAGAGATAGATACTTGAGTGATCAGAACTTCGACTCTTTCAATCCCAGCAAAGACACTTCCTATTTCATGAAGCAACTTTGTAAACTCAGAGATGAATTACTACTGAGTCAGCACCAGCATAACCTGTCCATGATCATGCAGCATTTGGATATGGAGGGAACCTTCTCTGCGAGAAAAGCTTATGAGCTCATTCGAACCAAGGAACCTAAATGGAGGGATAGTTCAGTTGTATGGATGGGCTCTATTTCTGCTAGGCATGCTCTGATGCTTTGGCTGGCATATCGAGGGAAGCTACTGACTAGGGACCGGATCAGTCAAGATATACCTGATGAGTCATGTGCGTTCTGTCAGCTTGAAAGGGAGTCCCACAGTCACCTGTTTTTCAAGTGCCATTTTATCAAGAGGGTCTTCAGAGGTGTCATGGAATGGTTGCATTATCGGAGGAGTCACAGCTCCATCTTAGGGACTTTACGATACTTGAGGAAGAACAGGAGTGTGGATGAAGATAGAAGAAAGGCTTGGGTCTATGCAATAGCTGCCATTGTCTATTTTGTGTGGACAACTCGTAACAGAATTATTTTTGAAAATATTTCACCAACACCTGAAGCGATTATACGGCAAGTACAGATTTTCGTAGTTGGCCATTGCTTTAAAATGCTAGGGAGATTTGTACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18231.p1 GENE.R_Transcript_18231~~R_Transcript_18231.p1 ORF type:complete len:1108 (-),score=181.40,RVT_1|PF00078.23|8.2e-50,zf-RVT|PF13966.2|1.2e+03,zf-RVT|PF13966.2|1.1e+04,zf-RVT|PF13966.2|6e-14,Exo_endo_phos|PF03372.19|3e-11 R_Transcript_18231:328-3651(-)
MKILTWNIRGLCSPPKQMQLRKIQKNLNVEMLCLQETHMNVHSWHDFVHKYFAGWSQTNNFQLNDNGRIGLLWDTKKVDIHIMLIDEQAITIKASHLVYGTVYMITCVYGYYSNGDRLDLWNHIAQVSSTNDPWMIFGDFNCVLDMNDRIGRPITAHEVRDFQECCMMNDLAQATTHGCKYTFQRAGVQSRIDRLLVNDKWAGINLHPIIEFFPPGQYSDHCMGIIGIHRQNIRKKTFRFYNMWAEHADFLKTVERNWHKDQSGYKQYQLCKKMSQTKQGMLVLNKDQFSRIFDRAERAEEELKKAQEKIFNGSNDATLLAEVQQLVLKAKNAKQAVMSFSSQRAKRDFFAWADKPTRFFHDFISRSKTNNFIARIRKQDGTFTTSQQQIVEEFVKFFEGLMGTQVEVQPIDPNIVHSGRCVSVLEAQALTVGVTDEEIRNALWDIEDLKAPGMDGFTAKFFKRAWEIVGEDVTRAVQEFFSTGKLLKQLNHAIISLIPKCDNAEEVANYRPISCVSVVYKIIAKIIANRMCGVIPNIVDGTQSAFIPGRHLLDHVLLLQEILKDYNRKRVPPCCLIKVDLKKAYDTISWDFLSQMLSSLGFPCKFIGWIMECVSNTSFSIRVNGEIHGYFKGARGLRQGDPMSPYLFTLCMEYLTRLMNTETNTEGFGFHSRCSRLKLTHLIYADDLIMFCKGNTTSVQSMKRTLDMFSRTSGLNINNLKSDVIFAGVNLQMKEQLLEVLAMRQGALPFRYLGIPLNPAKLKNVHFSPLITQIKEVISGWKTKSLSYAGRIELLKSGIQGILGFWFNTIFVPMGVIDEIISICRKFLWNGRKPLIAWKDLSKPKEEGGVGLKDWREWNKALLARQIHKLLNGGDSLWCKWVRDRYLSDQNFDSFNPSKDTSYFMKQLCKLRDELLLSQHQHNLSMIMQHLDMEGTFSARKAYELIRTKEPKWRDSSVVWMGSISARHALMLWLAYRGKLLTRDRISQDIPDESCAFCQLERESHSHLFFKCHFIKRVFRGVMEWLHYRRSHSSILGTLRYLRKNRSVDEDRRKAWVYAIAAIVYFVWTTRNRIIFENISPTPEAIIRQVQIFVVGHCFKMLGRFVL*

Click here to download the sequence:
Link to NCBI Protein BLAST