Transcript Information: R_Transcript_182409.p1


Annotated TAIR IDAT1G76450.1
Annotated Gene NamePhotosystem II reaction center PsbP family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28684618-28686109 | Forward length=247
E-Value3.9E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4824026898417
Replicate 20.58789641165635
Replicate 30.64138865269227
Condition 2: 8 Hour
Replicate 10.39177383915592
Replicate 20.71554821891794
Replicate 30.94388375226012
Condition 3: 24 Hour
Replicate 10.36732491564327
Replicate 20.26466310668693
Replicate 30.43775409373795


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_182409.p1 GENE.R_Transcript_182409~~R_Transcript_182409.p1 ORF type:complete len:250 (+),score=43.33,PsbP|PF01789.12|6.2e-36 R_Transcript_182409:132-881(+)
ATGACATGCCTGCGGCTGTGCCCTCCCCCTCCCATCTGCTGCTTCACCTTCACTTCTCATAGTAGCACTAACAAATCAGGCATTACGACAAACATGGGAAGCAGAAAGCAACGACAATCTGTTGTCTGCTCTTTGCCAAACAGTCAAGCTCTTACTACTACAAGAAGAGTGGCCACCCTGCACATAACCACCTTATCTGCACTTTACTTTTCCCATAATGCTGTTGCTCTGCCCCTGCCTCTCACTGATGCTCCTCCTGACTTTCGCCTTTACTCTGATGATGTCAATAAGTACCACATTTTCATTCCTCAAGATTGGCAAGTTGGAGCAGGGGAAACTAACGGATTCAAATCACTTACTGCATTTTACCCTGATGCAGCTTCTACTTCAAATGTCAGTGTGGCAATCACCGGTCTCGGTCCCGATTTCACCAGATTGGAATCATTTGGCAAGGTTGATGAATTTGCGGAAAATCTGGTTAACGGACTGGATAGAAGTTGGCAGAGGCCACCTGGGTTGGCAGCAAAGCTCCTAAACTGCAAGGCTTCCAATGGACTTTATTACCTAGAGTACACACTTCAGAATCCTGGGCCTGGGGAAAGTCGCAGGCACATCTATTCTGCAATTGGGATGGCAAACAATGGTTGGTATAACAGGCTCTACACGGTGACTGGGCAGTTTGTGGAAGAGGAAGGAGATAAATATAGTTCCAAGATTGAGAAGGCGGTGAAATCATTCAGACTGAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_182409.p1 GENE.R_Transcript_182409~~R_Transcript_182409.p1 ORF type:complete len:250 (+),score=43.33,PsbP|PF01789.12|6.2e-36 R_Transcript_182409:132-881(+)
MTCLRLCPPPPICCFTFTSHSSTNKSGITTNMGSRKQRQSVVCSLPNSQALTTTRRVATLHITTLSALYFSHNAVALPLPLTDAPPDFRLYSDDVNKYHIFIPQDWQVGAGETNGFKSLTAFYPDAASTSNVSVAITGLGPDFTRLESFGKVDEFAENLVNGLDRSWQRPPGLAAKLLNCKASNGLYYLEYTLQNPGPGESRRHIYSAIGMANNGWYNRLYTVTGQFVEEEGDKYSSKIEKAVKSFRLS*

Click here to download the sequence:
Link to NCBI Protein BLAST