Transcript Information: R_Transcript_18250.p1


Annotated TAIR IDAT5G33406.1
Annotated Gene NamehAT dimerisation domain-containing protein / transposase-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:12676126-12678403 | Reverse length=509
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18817485520329
Replicate 20.43291341064532
Replicate 30.23615193398095
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.23667842502788
Replicate 20.45474760599128
Replicate 30.22564644007111


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18250.p1 GENE.R_Transcript_18250~~R_Transcript_18250.p1 ORF type:5prime_partial len:194 (+),score=37.79,Dimer_Tnp_hAT|PF05699.10|3.3e-11 R_Transcript_18250:2-583(+)
CCAAGGTTTTTTAGTGATATTTGGCTTAATGAGAACCAAGCAAGAGTCCCTCCTCATAGAGATGGAGAAGTCTCTCAAGAAAGAATGAAATGCTTTCGAAGACTTTTCCCAAATGATGATGATTATGATAAGGTGTTGGATGAGTATGCTCATTTTTCTCTCAAGACGGGGCCTTTTTCGGATATTACTTCACTATCTAGGAGGGGCACAACCGATCCTAAGAGTTGGTGGGCTAACTTTGGTGCTCAATCACCTTTGCTACAATCATTGGCTTTTAGAGTGCTTGGCCAACCTACCTCTTCCTCTTGTTGTGAGCGAAACTGGAGCACTTACTCCTTTATTCACTCACTTAGGAGGAACAAGCTAACCCCTAAACGTGCCGAAGATTTAGTTTTCATCCTCAACAACCTACGTCTCTTATCAAGGAGCACCGATCAATATCATGATGAGAAGACCAAGATGTGGGATGTTGGTGGTGATGAGTTTGATAATTTTGAAGATATGGGGTTTTTGGAGCTTGCCGAGCTATCTCTTGATGAGCCCGTGTTGGAGAATGTGTTTTTCAATGATAATGCCGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18250.p1 GENE.R_Transcript_18250~~R_Transcript_18250.p1 ORF type:5prime_partial len:194 (+),score=37.79,Dimer_Tnp_hAT|PF05699.10|3.3e-11 R_Transcript_18250:2-583(+)
PRFFSDIWLNENQARVPPHRDGEVSQERMKCFRRLFPNDDDYDKVLDEYAHFSLKTGPFSDITSLSRRGTTDPKSWWANFGAQSPLLQSLAFRVLGQPTSSSCCERNWSTYSFIHSLRRNKLTPKRAEDLVFILNNLRLLSRSTDQYHDEKTKMWDVGGDEFDNFEDMGFLELAELSLDEPVLENVFFNDNAV*

Click here to download the sequence:
Link to NCBI Protein BLAST