Transcript Information: R_Transcript_182572.p1


Annotated TAIR IDAT1G53490.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19965146-19966811 | Forward length=304
E-Value4.7E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7705387163412
Replicate 22.2496036160319
Replicate 31.4316710997595
Condition 2: 8 Hour
Replicate 10
Replicate 21.597205845799
Replicate 30.8103397598387
Condition 3: 24 Hour
Replicate 12.2547846384352
Replicate 21.5753756350412
Replicate 32.5405371511577


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_182572.p1 GENE.R_Transcript_182572~~R_Transcript_182572.p1 ORF type:3prime_partial len:112 (+),score=12.42,zf-RING_5|PF14634.2|2.1e-09,zf-RING_5|PF14634.2|4.8e+03,zf-C3HC4_3|PF13920.2|3.2e-07,zf-C3HC4_3|PF13920.2|2.2e+03,zf-C3HC4_2|PF13923.2|2.6e-06,zf-C3HC4_2|PF13923.2|4.6e+03 R_Transcript_182572:630-962(+)
ATGAGATGTAATGCATGCTGGAGGGAATTGGAAGGTCGAGCCGTATCGACCACCTGTGGCCATCTCTTGTGCACAGAAGATGCAAGCAAGATACTAAATAGTGATGGAGCATGTCCCATATGTGATCAGGTGCTCTCTAAGAGTCATATGAAACCAGTTGATATTAATCCAACTGACGAGTGGGTTAATATGTCGATGGTAGGGATATCACCACAAATTTTGATGAAGAGTGCCTACAGAAGTGTGATGTTCTATATTGGGCAAAAGGAACTGGAGATGCAATGCAAAATGAACAGGATAGTTGCCCAGTGCCGACAGAAATGTGAGGCTATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_182572.p1 GENE.R_Transcript_182572~~R_Transcript_182572.p1 ORF type:3prime_partial len:112 (+),score=12.42,zf-RING_5|PF14634.2|2.1e-09,zf-RING_5|PF14634.2|4.8e+03,zf-C3HC4_3|PF13920.2|3.2e-07,zf-C3HC4_3|PF13920.2|2.2e+03,zf-C3HC4_2|PF13923.2|2.6e-06,zf-C3HC4_2|PF13923.2|4.6e+03 R_Transcript_182572:630-962(+)
MRCNACWRELEGRAVSTTCGHLLCTEDASKILNSDGACPICDQVLSKSHMKPVDINPTDEWVNMSMVGISPQILMKSAYRSVMFYIGQKELEMQCKMNRIVAQCRQKCEAM

Click here to download the sequence:
Link to NCBI Protein BLAST