Transcript Information: R_Transcript_182574.p1


Annotated TAIR IDAT1G53490.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:19965146-19966811 | Forward length=304
E-Value4.5E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.36874668595391
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 11.4839918149846
Replicate 20.67760248003593
Replicate 30.36669920445226
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 31.1054396306514


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_182574.p1 GENE.R_Transcript_182574~~R_Transcript_182574.p1 ORF type:complete len:99 (+),score=8.21,zf-RING_5|PF14634.2|1.6e-09,zf-RING_5|PF14634.2|3.2e+03,zf-C3HC4_3|PF13920.2|2.4e-07,zf-C3HC4_3|PF13920.2|1.1e+04,zf-C3HC4_2|PF13923.2|2e-06,zf-C3HC4_2|PF13923.2|2.2e+03 R_Transcript_182574:428-724(+)
ATGAGATGTAATGCATGCTGGAGGGAATTGGAAGGTCGAGCCGTATCGACCACCTGTGGCCATCTCTTGTGCACAGAAGATGCAAGCAAGATACTAAATAGTGATGGAGCATGTCCCATATGTGATCAGGTGCTCTCTAAGAGTCATATGAAACCAGTTGATATTAATCCAACTGACGAGTGGGTTAATATGTCGATGGTAGGGATATCACCACAAATTTGTATCCTTAAATGTCTAGCTTTTCTTGCACTCTCTGTTCAGAGCTCCTATTATGGTTCATGTGAAAGTTCAGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_182574.p1 GENE.R_Transcript_182574~~R_Transcript_182574.p1 ORF type:complete len:99 (+),score=8.21,zf-RING_5|PF14634.2|1.6e-09,zf-RING_5|PF14634.2|3.2e+03,zf-C3HC4_3|PF13920.2|2.4e-07,zf-C3HC4_3|PF13920.2|1.1e+04,zf-C3HC4_2|PF13923.2|2e-06,zf-C3HC4_2|PF13923.2|2.2e+03 R_Transcript_182574:428-724(+)
MRCNACWRELEGRAVSTTCGHLLCTEDASKILNSDGACPICDQVLSKSHMKPVDINPTDEWVNMSMVGISPQICILKCLAFLALSVQSSYYGSCESSV*

Click here to download the sequence:
Link to NCBI Protein BLAST