Transcript Information: R_Transcript_182666.p1


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0938495687587
Replicate 22.6584463059395
Replicate 33.196288966905
Condition 2: 8 Hour
Replicate 13.2268194116525
Replicate 24.8535247407224
Replicate 37.5514452451739
Condition 3: 24 Hour
Replicate 12.4322224711521
Replicate 21.5387389923659
Replicate 36.0516392803566


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_182666.p1 GENE.R_Transcript_182666~~R_Transcript_182666.p1 ORF type:complete len:387 (+),score=61.73,Myb_DNA-bind_3|PF12776.3|9.1e-16,Myb_DNA-bind_3|PF12776.3|2e+02 R_Transcript_182666:353-1513(+)
ATGGCCAATGATGAAAGGGAAATGGAAGTAAGCGATGGACAAAGAAATACTGAATCAAAGTCAAGGAAAGGGAATTTCATTTGGACGGATGCGTATGTTAAGATTTTTTGCAACATTTTATTGGAATTTCAGATGAAGTATGGTAAAAGTACGAAATATAAATGGTCTGCAATCCAACAAGATTTTGAACAAAGGACCAATAAAATATGTACTAATGTAAATTGTTGCAAGAACAAAATTGATACAATGAGGAAGGACTGGAACTCTTGGAAAGGATTAAAGAGAGGGGAAACTGGTCTAGGATGGGATCATGCAAGTGGTAGAATATCTGCTTCTAAGGAATGGTGGGACAAAAAAATCAAGGAAGATCCTAATTGCAGAAAGTTCCAAGATAAAGGAGTGTGTCATGAGATAGAAGATCTATGGGATAGATTATTTGCGGATACAGTCGCAACGGGGGTGAATTGTGTAACCCCGTCTATGGATCCTCCAAGTGTCAATAGGTCACAAGATGTGAATATGGAGAATGTGTATATACCCGTATATGATAACCCTAATATAGATGAAGATATTAGCAATAATGGTTATCCACAAAACATCCAATACTCTTCACATTTGGATGTGGAAGAGCTAGAGAGGCAAGAGAGTGGCTTTTTTAGCAACTTTGTGGAGGAATTGGAACGTGGAGGGAACCCCTCGGTTAATCAAAGTAGAGGTGTCACCCCTCATGCTCAAGGTGGAGGTGTTCCCCCTCTTGCTCAGAGTGGACTAAATAATTCGGAACATATTTTAGAGCAGGCTAAACAAACTCAAAAAACTCCCACATTGACTACAAAAGCCATGAAGCGTAGAAAAAGACAATCACCGGGAGCAGTATTGTTTCAAGAACATGTAACTAACATGAGTTCAAAATACGATCGTGCTTTGGAGATATTAGAGGCTGATTCAACAACTAGTGTGAATCAAACTCAAAGTGGGATTGCTTTAGCTCTTAGAGTTCTTGATCGTCTAGTTGACAAAGGTTCCATTGAAATGGGCAGTGATCTTTGGTGTTATGCAGCTACTTCACTCAAAGATGTTGATACACGAGAATTATTCATGAATTTGCGTGATGATGTTGCGAGGTTGGCTTGGATAAAATGGCAATTCAAGAACAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_182666.p1 GENE.R_Transcript_182666~~R_Transcript_182666.p1 ORF type:complete len:387 (+),score=61.73,Myb_DNA-bind_3|PF12776.3|9.1e-16,Myb_DNA-bind_3|PF12776.3|2e+02 R_Transcript_182666:353-1513(+)
MANDEREMEVSDGQRNTESKSRKGNFIWTDAYVKIFCNILLEFQMKYGKSTKYKWSAIQQDFEQRTNKICTNVNCCKNKIDTMRKDWNSWKGLKRGETGLGWDHASGRISASKEWWDKKIKEDPNCRKFQDKGVCHEIEDLWDRLFADTVATGVNCVTPSMDPPSVNRSQDVNMENVYIPVYDNPNIDEDISNNGYPQNIQYSSHLDVEELERQESGFFSNFVEELERGGNPSVNQSRGVTPHAQGGGVPPLAQSGLNNSEHILEQAKQTQKTPTLTTKAMKRRKRQSPGAVLFQEHVTNMSSKYDRALEILEADSTTSVNQTQSGIALALRVLDRLVDKGSIEMGSDLWCYAATSLKDVDTRELFMNLRDDVARLAWIKWQFKNK*

Click here to download the sequence:
Link to NCBI Protein BLAST