Transcript Information: R_Transcript_182709.p1


Annotated TAIR IDAT3G50580.1
Annotated Gene NameLOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: ECA1 gametogenesis related family protein (TAIR:AT1G44191.1); Has 132049 Blast hits to 55074 proteins in 2314 species: Archae - 393; Bacteria - 25609; Metazoa - 44661; Fungi - 17591; Plants - 17316; Viruses - 4153; Other Eukaryotes - 22326 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:18768767-18769519 | Reverse length=250
E-Value9E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53685179278585
Replicate 20.41169216502545
Replicate 30.44915171757162
Condition 2: 8 Hour
Replicate 10.2400574994828
Replicate 20.43844866355266
Replicate 30.71182786746616
Condition 3: 24 Hour
Replicate 10.67522962434424
Replicate 20.43245605667799
Replicate 31.0729267003381


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_182709.p1 GENE.R_Transcript_182709~~R_Transcript_182709.p1 ORF type:5prime_partial len:102 (+),score=6.95 R_Transcript_182709:1-306(+)
CTTCTCTCTCCTTTAGAGAGCCAACCACCCACTCTCTCCTTCACACAGCCAGACATCAACCCACTGGACAACCACCCAACTAATCTGAAAACCACAGAAAAACCCAACCTTACCTCAAAACCCATCAGGACATCACCCACGCGGCCACGCCCCACCCAACACCTACCACTCAAAACCTCCTTATCTTATCCTAAACCCCCACATAAGGCCTCCCATAGTCCAGATCTGGCAAACCACCACCAACAAAACCCTTCCCACCTCGGAAATCACCACCAAAAATCTTCCCATATCTCTAGTCCAACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_182709.p1 GENE.R_Transcript_182709~~R_Transcript_182709.p1 ORF type:5prime_partial len:102 (+),score=6.95 R_Transcript_182709:1-306(+)
LLSPLESQPPTLSFTQPDINPLDNHPTNLKTTEKPNLTSKPIRTSPTRPRPTQHLPLKTSLSYPKPPHKASHSPDLANHHQQNPSHLGNHHQKSSHISSPT*

Click here to download the sequence:
Link to NCBI Protein BLAST