Transcript Information: R_Transcript_18276.p1


Annotated TAIR IDAT3G55340.1
Annotated Gene Namephragmoplastin interacting protein 1
Annotated Gene Symbol(s)PHIP1
Annotation TypeOrtholog
Chromosome Positionchr3:20515672-20517832 | Forward length=597
E-Value3E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.601687182013
Replicate 239.995066966352
Replicate 333.222033807528
Condition 2: 8 Hour
Replicate 128.109565890812
Replicate 231.201230476073
Replicate 330.662023014142
Condition 3: 24 Hour
Replicate 137.081955014727
Replicate 236.603336636582
Replicate 339.518181400867


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18276.p1 GENE.R_Transcript_18276~~R_Transcript_18276.p1 ORF type:complete len:473 (+),score=116.43,RRM_1|PF00076.18|7.9e-14,RRM_1|PF00076.18|2.6e-10,RRM_6|PF14259.2|1.7e-12,RRM_6|PF14259.2|9.8e-08,zf-CCHC|PF00098.19|5.8e-07,Nup35_RRM_2|PF14605.2|1e-05,Nup35_RRM_2|PF14605.2|1.4e+03 R_Transcript_18276:44-1420(+)
ATGGTATTATCAAACAAGAAGTTGAAGCAGAAACTGAGAGCTGAGATTGCAAATATTTCAATCTCAAACAACTCTGATGTTAGCCCCACATCAATTAAGCAACTTCTAGACTCAAAAACCCCGAAACCCAGATTGTCCAAGAGAGAAAAAAAGCGCAGAAAAACCCCAACTTTAAACACCCCAAATGTGGAAACCCAACATAATAATGAAAATAAAGTTGCCCATGTTGAGGGAACAGAGAATGGAACAAAAAAGAAGAGAAAAAGAGAAACAAAGATGAGCAGTGATGAAAGGAGTGAACAAAGTATTGAGGAAAGAAAGGCAGCTAAGAGGGAGAAGAGAAAGATGAGGAGGAAAATAAAGGAGGATGGTGGTGGAGAATTGGTTGTGAATGAAGAAAAGAGTGATTTGAAGAAAGAAGTGAATTTGTCTAAGAAAAAGAAGAAAAAGAAGTATAAGAAGAATAAGAAGAGCAAGGAAGGTGTGAATGGGGCAGTTGTAGAAGAGCAAAGTGTCAATGAGAATGTTGATTATACCAACAGCGATGACAGTGCTGAACATAAAAAGAAAGTTTATGTTGGAGGCATCCCATTTTATTCAACAGAGGATGATATTCGGAGTTTCTTTGATAATTGTGGTACCATAACAGATATTGATTGCATGACATTTCCTGAGAGTGGGAAGTTCAGAGGAATTGCAATCATTAGTTTCAAGACCGAAGAAGCTGCAAAGAGAGCATTGGCCCTTGATGGATCCGACATGGGTGGTCTCTATCTGAAAATCCAACCCTACAAGGCACCAAGCACCAATAAAACAGCCACAACAGACTTCTGCCCGCCAGTCCTTGTGGGTTACAACAGGATATACGCTGGAAACCTGTCATGGGATATCACAGAAGATGACTTACGAAAGCTCTTGTCCGACTGTAAAATATCAGCCATTCGATTCGGCGAGGATAAGGAGACAGGCGAATTCAAAGGGTACGCGCATGTGGACTTTGCCGACAATGTCTCTCTAACAAAGGCATTGAAACTGGATCAGATGGTGGTGTGTGACAGACCTGTGAGAATAAGGTGTGCTGTTCCTCCTAAGAAAGGCGTGGTGGTAAATTCGGGATCTGTACCAAAATCTGGGTCTGTATCAACAGCTGTTAATGCTGAGAATAACACAGCAGATACATCTGTGAAGGCCGAGGCTGAGAATATCACAACTGAGACTGGAGATAAAAGCTCAGTTAGCTCAGGCAAGCTTCGGAGGAGGACTTGCTACGAGTGTGGGGAGAAAGGCCACATTTCCTCTGACTGCCCTAAGAAACAAGGCACTCAGGAAGCAAACTCTGGAATGATCATGTCAAAAGTATACACCTCACTCAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18276.p1 GENE.R_Transcript_18276~~R_Transcript_18276.p1 ORF type:complete len:473 (+),score=116.43,RRM_1|PF00076.18|7.9e-14,RRM_1|PF00076.18|2.6e-10,RRM_6|PF14259.2|1.7e-12,RRM_6|PF14259.2|9.8e-08,zf-CCHC|PF00098.19|5.8e-07,Nup35_RRM_2|PF14605.2|1e-05,Nup35_RRM_2|PF14605.2|1.4e+03 R_Transcript_18276:44-1420(+)
MVLSNKKLKQKLRAEIANISISNNSDVSPTSIKQLLDSKTPKPRLSKREKKRRKTPTLNTPNVETQHNNENKVAHVEGTENGTKKKRKRETKMSSDERSEQSIEERKAAKREKRKMRRKIKEDGGGELVVNEEKSDLKKEVNLSKKKKKKKYKKNKKSKEGVNGAVVEEQSVNENVDYTNSDDSAEHKKKVYVGGIPFYSTEDDIRSFFDNCGTITDIDCMTFPESGKFRGIAIISFKTEEAAKRALALDGSDMGGLYLKIQPYKAPSTNKTATTDFCPPVLVGYNRIYAGNLSWDITEDDLRKLLSDCKISAIRFGEDKETGEFKGYAHVDFADNVSLTKALKLDQMVVCDRPVRIRCAVPPKKGVVVNSGSVPKSGSVSTAVNAENNTADTSVKAEAENITTETGDKSSVSSGKLRRRTCYECGEKGHISSDCPKKQGTQEANSGMIMSKVYTSLN*

Click here to download the sequence:
Link to NCBI Protein BLAST