Transcript Information: R_Transcript_18301.p1


Annotated TAIR IDAT4G00800.1
Annotated Gene Nametransducin family protein / WD-40 repeat family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:337114-345581 | Reverse length=1913
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.459156998716
Replicate 28.5421790641044
Replicate 311.043458756882
Condition 2: 8 Hour
Replicate 18.9437843544148
Replicate 29.2856504066818
Replicate 312.228453470577
Condition 3: 24 Hour
Replicate 111.394322218803
Replicate 28.845319618221
Replicate 311.404646126331


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18301.p1 GENE.R_Transcript_18301~~R_Transcript_18301.p1 ORF type:complete len:1900 (+),score=334.37,Vps8|PF12816.3|1.4e-54,Vps8|PF12816.3|8.7e+02,Vps8|PF12816.3|32,Clathrin|PF00637.16|6e+02,Clathrin|PF00637.16|0.48,Clathrin|PF00637.16|1.6e+03,Clathrin|PF00637.16|2.1e-08 R_Transcript_18301:163-5862(+)
ATGACAAGAAACTACCCGTCAACGAAACCTCCGGTGTCGGAGCTCGACCTAGACTCCTTTCTCCGGCGCCACAACGCAGGCTCCGACGACGACGACGACAACCTCCACCGTACTGTCGACGACATTCTCAACGACTCCGATTCCTCATCACCATCTTCCCCCTCCTCATCTTCACCACCGTCTTCGAGTCGCATTTCTTACTCCTCTTCCAAAGAGGATCCTCCTAATCGCGATGACAACACCTCAATTTCATCCTTCAAAACCCTAAATTCGACCGACAAACCCTCAACTTCCTCCCAATTGAAGTATAACCTAATCCAACGCCTGAAATCCGATGAATTTTTTACGAAGAAACCGCCGTTACGATCTCCGTCACTGTTTAGCGGCGGAGTTAGGTCAACGGCGAAACCTGGAGCCGCACTTGCTGCCGCAGCCGCCGCTTCGAGGTCTAAAACGACGTCGTTTTCTGCCGCGATTAAGTCGAGAAGAGCTTTGAGTGTTAGTTTGGACGGTAAGGTTTCTGATGGCGATGAAGTTTTTGCGTCTGTTAAAGATGACTTTACCGATCGTATTAGTCTCAGCGGTCAAGCTGATTTCAAGTCGGAGGCTAGTGATCGTAATGATAACGTTATTGAGCGAATTGAAGAGAGAAATTTTGAAGATCACAATACTGATTTTACGGAATCGGATGACCGCATTAAAGAAAATGGAGATGATGAGGTACAAATAGCTGAAGTACAGACTGCAATCGATGAAGTTGATTCGAGTACAGAAGAAGAAAAAGAGAAACCTTCAGTTTCAATATCAGAAGATGTGGAGAAATCAGATAATGTGCAATCTGATTATAAAGAAGTTGAGTCTTTACTTGAATTCAAAAACGAGAGAATCACTGAGCAGGATGAAGAGAACTTTAGTTCGAGTTCCATAAGCGATCAAGTAACGGAGCTAGTTGAGGATAGAATTGCGCAATTAGAGAGTGAGAGGGCTATGAGAGAGGCTGAGGAGGAGGAGAAGAAGGTTCGAGTTCCAGCAAAGAAGCCGTTAGAATTAGCAGAAGAGGTGGAGAAAAAACAGGCTTCCACTGGTATGGACTGGGAGGAAGGAGCTGCTGCTCAACCTATGAGGCTTGAAGGTGTTCGGAGAGCTTCGACGGTTTTAGGATATTTTGATACTGATGATGATAATTCTATCACTAGAACTATCAAATCTCAGGCTTTTAGGCGCGATTATGGTATCCCACAGGTCTTGGCTGTGCATCTCAATTACATTGCTTTTGGGATGTCCAAAGGCGTTGTTGTTCTTGTTCCCAGTAAATATTCTGCTCATCAACCAGATATCATAGACACCAAGATGATGATGCTTCGTACACAAGGGGATAAATCCCAGGTCCCAGTGACGTCCATTTGTTTCAATCAACAAGGTGACCTCCTTTTCGCTGGTTATGGTGATGGTCATAGTACTCTTTGGCATATACCAAGGGGAACAATTGCGAAGGTTATTTCTGGAGAGCATACAGCACCTGTGGTACACACATTGTTTCTTGGGCAGGATCCTCAAGTTACTCGTCAGTTTAAAGCGGTTACTGGTGACAGTAAAGGCCTAGTACTGTTACATGAAATCTCCGTCATGCCATTGCTTGGTACCACAATCAAGACCCAGTGTCTTCTCGATGGACAAAGAACGGGCACAGTGCTATGTGCATCACCACTTCTTCCTGATGAGATTACTGGGGCTGCTCCACAAACTTCCCAAGGCAACAGCGCAGCCTCAGCTAGCAGCATAGGCGGTGTGATGGGGGGTGTAGTTGGGGGAGCTGCTGGGTGGAAACTCTTCAGTGAAGGTTCCTCCTTGTCTGAAGAAGGTGTGGTCATCTTTGTCACCCATCAGAATGCTCTGGTGGTGAGGCTTAGTCCCAGCTTGGAAGTCTATGCATCACTTCCTAAGCCAGATGGGATACGGGAGGGTTCTATGCCATACACCGCTTGGAAATGTACAATACAGAGTCATGGTTCTGCCTCAGAGAGTATGAATTCAGATGTGGAGAAGGTCTCACTTCTTGCAATCGCATGGGATCGGAAGGTTCAGGTCGCAAAGTTAGTGAAGTCAGACTTGAAGGCATGTGGAAAATGGACACTTGACAGTGCAGCTATAGCTTTGGCATGGCTTGATGATCAGATGTTGGTAGTTCTTACATTAGCTGGACAACTTTGCTTGTTTACAAGGGATGGAGCCTTGATCCACCAGACTAGTTATGCAATTGATGGTTCTGGAGGAGATGACCTCATTGCTTATCACACTTATTTTACCAATGTATTTGGCAATCCTGAGAAAGCTTATCACAATAGCGTTGCTGTTAGAGGAGCGTCTGTGTATATACTAGGACCTATGCATTTTGTTGTCTCTCGTCTTCTTCCTTGGCAAGAACGAATTCTGGTTTTGCAAAAGGCAGGTGACTGGATGGGTGCCTTGAACATGGCAATGACACTATATGATGGTCAGGCCCATGGTGTCATTGACCTCCCGAGAAACTTGCATGCCGTACAGGAGGCTATAATGCCCTATCTTTTGGAGTTGCTTTTCTCTTATGTAGATGAAGTTTTTTCATATATTTCGGTTGCAAGTGTCAATCAGATTGAAAAGGTGGAAGAATCGAATGGTTCCAAGAGTAGTACTTCTACATATTCTGAGATAAAAGATCAATTTATCCGTGTGGGTGGTGTAGCAGTCGAATTTTGTGTCCATATCAAAAGGACTGACATCCTCTTTGATGAGATCTTCTCAAAATTTGTAGCAGTTCAACATCGAGATACATTTTTGGAGCTTCTGGAGCCATATATATTAAAGGATATGCTTGGATCATTACCTCCTGAGATCATGCAAGCTCTGGTAGAACACTACAATAGCAAAGGGTGGTTGCAACGAGTAGAGCAATGCGTTCTGCACATGGATATTTCATCTCTGGATTTCAATCAGGTTGTTAGGCTTTGCCGGGAGAATGGATTGTATGGTGCCCTGATATACCTTTTTAACAAAGGTCTGGATGATTTTAAGACACCTCTGGAGGAACTCTTGAGTGTGCTAAGAAATCGAGAAAGAGATGCTGCTGCTGGTGTGGGGTACCGGATGTTAGTTTATCTGAAGTATTGCTTCTCAGGCCTTGCCTTTCCCCCAGGACACGGAACTCTCCCTTCAGAACGTTTGCCTTCTCTTAGGATGGAGCTTGTGCAATATCTGTTGGAGGATTCAGGTGGCCCAAAGTCACAGAGAGCTGCAAGCCTAACTTCCACAGGAGCATACCTGAACTTGCATTATTTACTAGAGTTGGATACAGAGGCTACGTTGGATGTTTTAAGGATTGCTTTTGGAGAACATGTGAATTTCAAGCCGGAAACAACGTTTGATCCAACTACTGATAATGCAAACAAGAATGACCCAATAACTGAAAATCAGGATACAATGGTTCAGAAAACAGTGGATGCTCTAGTCCTTATTCTTGATGTAGATATTTCTCAAACAATCAGATCGGCTGGCAGTGATGATGCTGGGTCAGGAGTCTGGCCTTCAAAAAAAGATATAGGCCACCTCATTGAGTTCATAGCAAGCTATGTCGCATCTAAAAGAGCCAACGTTTCAAAGAGCGTGTTAAGCCAGATATTGGAATACTTGACATCAGAGAATTGTCTCTTGCCAAATGATTCCAAGGAGAAGAATATATCTAAGCGAAGAAGGGAGAAAAAGGTGCTTGCTCTTTTGGATGTGGTTCCTCAGACCGAGTGGAATGCCTCATATGTCTTGCATTTGTGTGAAGAGGCTCAATTTCACCAGGTTTGTGGTTTAATTCACACTATCAGACATCAGTATCTTGCTGCTCTGGATAGCTATATGAAAGATGTGGATGAACCAGTGCATGCATTTTCCTTCATCAATAGTATGTTACTGGAGCTGAATGAAATAGAATCTCTTCCTTTCCGTTCAGCAGTCATGTCCCGGATTCCCGATTTAGTCAGCTTGAACAGGGAATGCGCATTTCACTTGGTCGTTAATCACTTCAACAAAGAAAGTGGACGCATTCTTTCTGATCTGAGATCTAATCCAAAAAGCCTCTTTCTTTATCTTAAGACAATTGTCGAGGTTCATTTATCAGGTACCCTTAAATTCTCCTGCATAGGGGCAGATGATATTGTCGAGGGTCCTTGTGGTGGAAGGTTGAAAGATGGGCGAACTTGGTTTGAGGCCTATCTGGAAAGGATTTCTGAATTTCCTAAGGTTCTACGTAATAGCCCAGTAGAAGCTACTGATGACATGATCGAACTTTATCTTGAGATGTTATGTCAGTACGAACCAGATTCAGTTCTCAAGTTCTTAGACACCTTCGAAAATTATAGAGTGGATCGTTGTTTACAATTGTGTCAAGAATATGGCATTGTTGATGCAGCTGCATTTCTGTTAGAAAGGGTTGGTGATGTTGGAAGTGCACTGGTTCTGATCCTTTCGGGCGTCAATGATAAATTTGTCATACTTGACACTGCTGTAGCAAGAATGGTTTCTGAGATGGCTGCACGCAAACATAATCCTCCTGTTGACTATTTTTCAGCTGCTTCAGGGTTGAAAGAGGTACGAGACATTAGGAAAATTCTGCAAGCATGTATTGGCCTCTGTCAACGAAATACTCCTCGTTTGGTTCCAGAAGAGTCAGAATCACTTTGGTTCCATTTGCTAGACTCGTTTTGTCAACCATTAATTAGTTCCAAGGGGAACTCTGGCATCTTCACTCAATCTTTGAGCTCTAAAGGTGATCAAGACATGAATGTTGTCACATGGAGGGTCCCTAAGAGCCAGAAATATGCTCCTGTACTCAAGAGATTAATTTCACAATTTGTTAAGGAGATTGTAGAGGAGATGATTGGATATGTTCGCCTTCCTTCTATCATGGCCAAACTGGTCTCAGATAATGGTACTCAGGAATTTGGTGATTTTAAGCTGACTATATTGGGAATGCTAGGAACATATGGCTTTGAAAGGAGGATCCTGGATACTGCCAATTCCTTGATAGAGGACGATACTTACTATACCATGAGTGTGCTCAAGAAGGGGGCCTCAAAAGGGTATGCCCCTCGAAGTCTCCTATGTTGTATATGTAACTGCTCTTGCAGCGAGAATTCTTCCAGTTCTGGCGTTCGGGTGTTCACCTGTGGCCATGCAACCCATCTAGAGTGTGAAATCCAAGAGAATGTTACATCACATCAAAGCTCTAGTGGATGTCCCATATGTGTGCCTGCGAAGAAAAGCCAGAAAAGTAAAGGTAAATTGATAGAACAAGGGTTGGTTGGCACATCTTCATCTAGATCAAGGCAAGCACAGGGGACATCTATGATGCTCCAACATGAGCTGGATGCATTTGATAACTCCTTTGCTTCTCATCAGATATCAAGATTTGAGATGTTGTATAGTCTTCAGAAGAACCAAAGATTGATCCGAACTGATACGATGCCTCAGTTGAGGTTAGCACCACCAGCTGTTTATCATGATAAAGTGAACAAAAGAAATCATTTTTCAGCAGGAGCAAATAGTGGAGGTCTGACAGATACAGAAAAGCCGAGTAAGAATGGGCAGCTTCGGGATGTTAGAGTGAAAGGTCCATCTATTCGGTTTCCACTTAAATCAAAAATTTTTGGCAGAGAGAAGACCCGTCTACAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18301.p1 GENE.R_Transcript_18301~~R_Transcript_18301.p1 ORF type:complete len:1900 (+),score=334.37,Vps8|PF12816.3|1.4e-54,Vps8|PF12816.3|8.7e+02,Vps8|PF12816.3|32,Clathrin|PF00637.16|6e+02,Clathrin|PF00637.16|0.48,Clathrin|PF00637.16|1.6e+03,Clathrin|PF00637.16|2.1e-08 R_Transcript_18301:163-5862(+)
MTRNYPSTKPPVSELDLDSFLRRHNAGSDDDDDNLHRTVDDILNDSDSSSPSSPSSSSPPSSSRISYSSSKEDPPNRDDNTSISSFKTLNSTDKPSTSSQLKYNLIQRLKSDEFFTKKPPLRSPSLFSGGVRSTAKPGAALAAAAAASRSKTTSFSAAIKSRRALSVSLDGKVSDGDEVFASVKDDFTDRISLSGQADFKSEASDRNDNVIERIEERNFEDHNTDFTESDDRIKENGDDEVQIAEVQTAIDEVDSSTEEEKEKPSVSISEDVEKSDNVQSDYKEVESLLEFKNERITEQDEENFSSSSISDQVTELVEDRIAQLESERAMREAEEEEKKVRVPAKKPLELAEEVEKKQASTGMDWEEGAAAQPMRLEGVRRASTVLGYFDTDDDNSITRTIKSQAFRRDYGIPQVLAVHLNYIAFGMSKGVVVLVPSKYSAHQPDIIDTKMMMLRTQGDKSQVPVTSICFNQQGDLLFAGYGDGHSTLWHIPRGTIAKVISGEHTAPVVHTLFLGQDPQVTRQFKAVTGDSKGLVLLHEISVMPLLGTTIKTQCLLDGQRTGTVLCASPLLPDEITGAAPQTSQGNSAASASSIGGVMGGVVGGAAGWKLFSEGSSLSEEGVVIFVTHQNALVVRLSPSLEVYASLPKPDGIREGSMPYTAWKCTIQSHGSASESMNSDVEKVSLLAIAWDRKVQVAKLVKSDLKACGKWTLDSAAIALAWLDDQMLVVLTLAGQLCLFTRDGALIHQTSYAIDGSGGDDLIAYHTYFTNVFGNPEKAYHNSVAVRGASVYILGPMHFVVSRLLPWQERILVLQKAGDWMGALNMAMTLYDGQAHGVIDLPRNLHAVQEAIMPYLLELLFSYVDEVFSYISVASVNQIEKVEESNGSKSSTSTYSEIKDQFIRVGGVAVEFCVHIKRTDILFDEIFSKFVAVQHRDTFLELLEPYILKDMLGSLPPEIMQALVEHYNSKGWLQRVEQCVLHMDISSLDFNQVVRLCRENGLYGALIYLFNKGLDDFKTPLEELLSVLRNRERDAAAGVGYRMLVYLKYCFSGLAFPPGHGTLPSERLPSLRMELVQYLLEDSGGPKSQRAASLTSTGAYLNLHYLLELDTEATLDVLRIAFGEHVNFKPETTFDPTTDNANKNDPITENQDTMVQKTVDALVLILDVDISQTIRSAGSDDAGSGVWPSKKDIGHLIEFIASYVASKRANVSKSVLSQILEYLTSENCLLPNDSKEKNISKRRREKKVLALLDVVPQTEWNASYVLHLCEEAQFHQVCGLIHTIRHQYLAALDSYMKDVDEPVHAFSFINSMLLELNEIESLPFRSAVMSRIPDLVSLNRECAFHLVVNHFNKESGRILSDLRSNPKSLFLYLKTIVEVHLSGTLKFSCIGADDIVEGPCGGRLKDGRTWFEAYLERISEFPKVLRNSPVEATDDMIELYLEMLCQYEPDSVLKFLDTFENYRVDRCLQLCQEYGIVDAAAFLLERVGDVGSALVLILSGVNDKFVILDTAVARMVSEMAARKHNPPVDYFSAASGLKEVRDIRKILQACIGLCQRNTPRLVPEESESLWFHLLDSFCQPLISSKGNSGIFTQSLSSKGDQDMNVVTWRVPKSQKYAPVLKRLISQFVKEIVEEMIGYVRLPSIMAKLVSDNGTQEFGDFKLTILGMLGTYGFERRILDTANSLIEDDTYYTMSVLKKGASKGYAPRSLLCCICNCSCSENSSSSGVRVFTCGHATHLECEIQENVTSHQSSSGCPICVPAKKSQKSKGKLIEQGLVGTSSSRSRQAQGTSMMLQHELDAFDNSFASHQISRFEMLYSLQKNQRLIRTDTMPQLRLAPPAVYHDKVNKRNHFSAGANSGGLTDTEKPSKNGQLRDVRVKGPSIRFPLKSKIFGREKTRLQ*

Click here to download the sequence:
Link to NCBI Protein BLAST