Transcript Information: R_Transcript_18320.p2


Annotated TAIR IDAT5G61500.1
Annotated Gene Nameautophagy 3 (APG3)
Annotated Gene Symbol(s)ATATG3, ATG3
Annotation TypeOrtholog
Chromosome Positionchr5:24734216-24736711 | Reverse length=313
E-Value3.4E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.738357480966
Replicate 237.291936560291
Replicate 327.693220078931
Condition 2: 8 Hour
Replicate 127.592280649508
Replicate 240.549957368717
Replicate 335.084083214032
Condition 3: 24 Hour
Replicate 136.149980037653
Replicate 229.461875682189
Replicate 332.341533791087


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18320.p2 GENE.R_Transcript_18320~~R_Transcript_18320.p2 ORF type:complete len:134 (+),score=24.87,Autophagy_act_C|PF03987.11|1.7e-17,Autophagy_C|PF10381.5|2.4e-16 R_Transcript_18320:982-1383(+)
ATGCTGGAAGTACGGATCACTGACTCATCATCATTTATCTCCACTTGGAACCCCTTCAGAAAGTATGACAAGTATTATCAAACTCCTCGCATATGGCTTACTGGATATGATGAGTCTAGGATGCTCTTGCAACCAGAGCTTGTGCTTGAAGACGTTAGTCAGGACCATGCACGCAAAACGGTAACTATAGAGGATCATCCACATTTGCCTGGGAAGCATGCATCTGTACATCCATGCCAGCATGGAGCAGTAATGAAGAAAATTATTGACGTTCTGATGTCACGTGGTGTTGAGCCTGAAGTTGACAAGTATCTCTTCTTATTCTTGAAATTTATGGCATCAGTAATTCCAACCATCGAGTATGATTACACCATGGATTTTGATCTGGGTAGCAGCAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18320.p2 GENE.R_Transcript_18320~~R_Transcript_18320.p2 ORF type:complete len:134 (+),score=24.87,Autophagy_act_C|PF03987.11|1.7e-17,Autophagy_C|PF10381.5|2.4e-16 R_Transcript_18320:982-1383(+)
MLEVRITDSSSFISTWNPFRKYDKYYQTPRIWLTGYDESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGKHASVHPCQHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSS*

Click here to download the sequence:
Link to NCBI Protein BLAST