Transcript Information: R_Transcript_183366.p1


Annotated TAIR IDAT5G54600.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22183046-22184403 | Forward length=198
E-Value6.7E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.555948421806
Replicate 231.600492545741
Replicate 331.58353214015
Condition 2: 8 Hour
Replicate 125.96985676223
Replicate 225.861827988038
Replicate 327.50244033392
Condition 3: 24 Hour
Replicate 121.218579407424
Replicate 218.9363333909
Replicate 326.751639061763


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_183366.p1 GENE.R_Transcript_183366~~R_Transcript_183366.p1 ORF type:complete len:198 (+),score=50.57,KOW|PF00467.25|3.3e-08 R_Transcript_183366:407-1000(+)
ATGGCAGCCATGGCTGCTCTTCAAAGCTCCTTCACTTCTCTTTCTATCTCCTCCAACTCTTTTCTTGGCCAACGGCTCTTCCCTTCTACTATCAACCCTCAGTCCTTGCAGCTCAAGCCCACAGAGCAGCCACCATGTCTAATCGTCATGAGGCTCAAGCGCTGGGAGCGAAAAGATTGTAAGCCAAACAGTCTTCCAGTGCTTCATAAAATGCATGTCAGGCTTGGGGATACAGTCAAAGTAATAGCCGGAAGTGAAAAAGGTAAGATTGGAGAGATCACTAAGATCTTCAAACACAACAGCACAGTTATTGTCAAGGACACTAACTTGAAGACAAAGCATGTGAAGAGTAAAGGAGAGAATGAACCAGGTCAGATAATCAAGATTGAGGGACCTATCCACAGTTCCAATGTCATGCTATACTCAAAGGAAGAGGAAGTGGCTAGTCGGGTTGGTCATAAAATGCTTGACAATGGAACAAAAGTTCGTTACCTCATTAAAACTGGAGAGATCATCGACAGTCCAGAGAAGTGGAAGGAAAGGATAGCAAGTAAGAAGGAAACTGAGACAGCTGTTGCTGCTCCTGCTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_183366.p1 GENE.R_Transcript_183366~~R_Transcript_183366.p1 ORF type:complete len:198 (+),score=50.57,KOW|PF00467.25|3.3e-08 R_Transcript_183366:407-1000(+)
MAAMAALQSSFTSLSISSNSFLGQRLFPSTINPQSLQLKPTEQPPCLIVMRLKRWERKDCKPNSLPVLHKMHVRLGDTVKVIAGSEKGKIGEITKIFKHNSTVIVKDTNLKTKHVKSKGENEPGQIIKIEGPIHSSNVMLYSKEEEVASRVGHKMLDNGTKVRYLIKTGEIIDSPEKWKERIASKKETETAVAAPAS*

Click here to download the sequence:
Link to NCBI Protein BLAST