Transcript Information: R_Transcript_183616.p1


Annotated TAIR IDAT1G40087.1
Annotated Gene NamePlant transposase (Ptta/En/Spm family)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:14999762-15001868 | Reverse length=390
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.405428963025
Replicate 21.139334131117
Replicate 32.3084309205425
Condition 2: 8 Hour
Replicate 11.3286903459746
Replicate 21.5600615238036
Replicate 31.2663914386316
Condition 3: 24 Hour
Replicate 10.8898374894459
Replicate 20.85485499575881
Replicate 31.3573770348464


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_183616.p1 GENE.R_Transcript_183616~~R_Transcript_183616.p1 ORF type:5prime_partial len:129 (+),score=21.06 R_Transcript_183616:2-388(+)
TCTCAAAGACAGAGAACAACAAGAAGTAAGGGACCAAGGGTAGTCAGTGGAAATGATGGACAAGTTCCGAATTGGTCAGATGACATACAATTTGACGAAAAAGAAGATGTTCTGACAATTGATGCTGATGGAAATGAACAAATCATGACGGGTTCCATACACCCTAGAGATGTTTGGTTTAGTAAAGAAGGAACAAGGTTTGTGGTTTTGTTTAATGAGTTCAACCAGCCTATTAGGAAGGGTGGATCTCTCTTTGTTAGATTTCTTAGAGAAGTAGCAAGGAGAGAGGAGCTTTGTCCTATTGGGGTAACAAACTGGCGCCATTTAAATGAGAGATACAAAATAGACATTATTGACTTAGTTAGAGTAAGTAGCATTTTAGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_183616.p1 GENE.R_Transcript_183616~~R_Transcript_183616.p1 ORF type:5prime_partial len:129 (+),score=21.06 R_Transcript_183616:2-388(+)
SQRQRTTRSKGPRVVSGNDGQVPNWSDDIQFDEKEDVLTIDADGNEQIMTGSIHPRDVWFSKEGTRFVVLFNEFNQPIRKGGSLFVRFLREVARREELCPIGVTNWRHLNERYKIDIIDLVRVSSILV*

Click here to download the sequence:
Link to NCBI Protein BLAST