Transcript Information: R_Transcript_183617.p1


Annotated TAIR IDAT1G40087.1
Annotated Gene NamePlant transposase (Ptta/En/Spm family)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:14999762-15001868 | Reverse length=390
E-Value7E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10864857711142
Replicate 20
Replicate 30.54539851419411
Condition 2: 8 Hour
Replicate 10.72874598057277
Replicate 21.0648038971993
Replicate 30.97240771180645
Condition 3: 24 Hour
Replicate 10.95657530115434
Replicate 20.26256260584021
Replicate 30.91198769528739


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_183617.p1 GENE.R_Transcript_183617~~R_Transcript_183617.p1 ORF type:internal len:168 (+),score=26.25 R_Transcript_183617:2-502(+)
TCTCAAAGACAGAGAACAACAAGAAGTAAGGGACCAAGGGTAGTCAGTGGAAATGATGGACAAGTTCCGAATTGGTCAGATGACATACAATTTGACGAAAAAGAAGATGTTCTGACAATTGATGCTGATGGAAATGAACAAATCATGACGGGTTCCATACACCCTAGAGATGTTTGGTTTAGTAAAGAAGGAACAAGGTTTGTGGTTTTGTTTAATGAGTTCAACCAGCCTATTAGGAAGGGTGGATCTCTCTTTGTTAGATTCCTTGGAGAAGTAGCAAGGAGAGAGGATCTTTGTCCTATTGGGGTAACAAACTGGCGCCATTTAAATGAGAGATACAAAATAGACATTATTGACTTAGTTAGAGGAAGTTTTGTGTTCCCCGACGGCAAGGTCTTCGATGAAGGAGTGTTTAGGCATGTTAGTAAACATTGTAGGCAATATAGGTATGAGCTGAAAGCAAAAAATTTTAAGCCTGACACAATGACAAGACAAGCAATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_183617.p1 GENE.R_Transcript_183617~~R_Transcript_183617.p1 ORF type:internal len:168 (+),score=26.25 R_Transcript_183617:2-502(+)
SQRQRTTRSKGPRVVSGNDGQVPNWSDDIQFDEKEDVLTIDADGNEQIMTGSIHPRDVWFSKEGTRFVVLFNEFNQPIRKGGSLFVRFLGEVARREDLCPIGVTNWRHLNERYKIDIIDLVRGSFVFPDGKVFDEGVFRHVSKHCRQYRYELKAKNFKPDTMTRQAI

Click here to download the sequence:
Link to NCBI Protein BLAST