Transcript Information: R_Transcript_18366.p1


Annotated TAIR IDAT1G62020.1
Annotated Gene NameCoatomer, alpha subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:22919814-22923728 | Forward length=1216
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 142.390592668424
Replicate 221.891958842588
Replicate 331.73870369147
Condition 2: 8 Hour
Replicate 129.949486986335
Replicate 233.788961732128
Replicate 350.181236907879
Condition 3: 24 Hour
Replicate 147.102113106225
Replicate 239.243524637951
Replicate 345.355489777771


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18366.p1 GENE.R_Transcript_18366~~R_Transcript_18366.p1 ORF type:complete len:1219 (+),score=289.68,COPI_C|PF06957.7|1.1e-167,Coatomer_WDAD|PF04053.10|1.4e-131,WD40|PF00400.28|8.8e+02,WD40|PF00400.28|0.0014,WD40|PF00400.28|2.8e-06,WD40|PF00400.28|5.6e-06,WD40|PF00400.28|0.0041,WD40|PF00400.28|0.00062,WD40|PF00400.28|1.7e+03 R_Transcript_18366:342-3998(+)
ATGTTAACGAAATTCGAGACAAAGAGTAACAAAGTCAAAGGATTGAGTTTCCACAGTAAGAGACCATGGATCCTTGCCAGTCTTCACAGTGGAGTGATCCAGCTTTGGGACTACAGGATGGGAACTCTTATCGATCGCTTCGACGAACACGATGGTCCTGTTCGTGGCGTTCACTTTCATAACTCTCAGCCATTGTTCGTTTCCGGAGGTGATGACTACAAGATCAAAGTTTGGAACTACAAATTGCATAGGTGTCTGTTTACCCTGCTTGGACACCTTGATTACATTCGTACAGTGCAGTTCCACCATGAGAATCCATGGATCGTCAGTGCCAGTGATGACCAGACTATCCGCATATGGAACTGGCAGTCTAGGACATGTATCTCTGTCTTGACGGGCCACAATCATTATGTGATGTGTGCCTCATTTCACCCGAAAGAAGATCTCGTTGTGTCTGCATCTCTTGATCAAACAGTTCGGGTCTGGGACATTGGATCGCTAAGAAAGAAGTCTGTATCTCCTGCAGATGACTTATTGCGGTTGAGTCAGATGAATTCTGATCTTTTTGGGGGTGTTGATGCTGTGGTGAAGTATGTATTGGAAGGCCATGATAGGGGGGTCAACTGGGCTGCTTTCCATCCTACTCTGCCATTGATTGTGTCTGGAGCTGATGACCGTCAAGTAAAGTTGTGGCGTATGAATGATACCAAGGCCTGGGAAGTGGACACATTGAGGGGACATATGAATAATGTTTCCTGTGTTATGTTCCATATCAAGCAGGACATTATAGTTTCAAATTCAGAGGACAAAAGTATTCGCGTCTGGGATGTGACGAAGCGTACCGGTATCCAAACTTTTCGTAGGGAGCATGATAGATTTTGGATTCTTGCAGCTCATCCTGAGATGAATCTTCTAGCTGCTGGTCATGATAGTGGGATGATTGTGTTCAAATTGGAGAGAGAACGACCTGCATTTTCTGTCAGTGGTGATACAATGTTCTATGCAAAAGATCGTTTCTTGCGGTTCTTTGAGTTTTCAACCCAGCGAGATACACAGGTAATCCCAATTCGACGGCCTGGCTCCACAACCTTGAATCAGGGCCCTCGGACACTTTCTTATAGTCCAACAGAGAATGCTGTCCTCATTTGTTCTGATGTTGATGGTGGATCGTATGAGCTGTATATTGTGCCTAAAGATGCCTTTGGTAGGGGTGATGTTGCTCAAGAGGCAAAAAGAGGTGTCGGAGGATCTGCTATTTTTATTGCTCGCAACAGGTTTGCAGTTCTTGACAAAAGCAGCAACCAAATATTAGTCAAGAACCTGAAAAATGAGATTGTGAAGAAGAGCACACTTCCTATTGCCGCTGATGCAATATTCTATGCTGGTACTGGTAATCTGCTATGTAGGGCAGAGGATAGAGTGGTAATTTTTGATCTTCAACAAAGGATTGTTATAGGAGAACTTCAGACACCTTTTGTCAAGTATGTTGTGTGGTCAAATGACATGGAGAGTGTTGCCTTGCTGAGCAAACATGCTATTGTGATTGCAAGTAAGAAACTTGTGCATCAGTGCACTCTTCATGAGACAATTCGTGTTAAGAGTGGAGCCTGGGATGATAATGGAGTCTTCATCTATACAACTTTGAATCACATTAAGTATTGTCTTCCCAATGGTGACAGTGGCATAATTAGAACACTTGATGTTCCAATCTACATCACAAAAGTCTCTGGTAACACTATCTTTTGCTTGGATCGGGATGGAAAGAACAAGGCCATAGTTATTGACGCAACAGAGTATATCTTCAAGCTCTCTCTGATGAGGAAGAGGTATGACCATGTCATGAGCATGATAAGGAGCTCTCAACTTGTGGGGCAGTCAGTGATAGCTTATTTACAGCAGAAAGGATTCCCTGATGTAGCTTTACATCTTGTGAAAGATGAGAGGACTCGTTTCAACTTGGCCCTGGAGAGTGGCAACATCCAAATTGCCGTAGCTTCAGCTAAGGAACTTGATGAGAAAGATCACTGGTATAGATTAGGGCTAGAGGCTCTTCGCCAGGGTAATACTGGTATTGTAGAGTATGCATACCAGAGGACGAAAAATTTTGAGAGGCTGTCTTTTCTGTATCTGATTACAGGGAATATGGAGAAGTTGAGCAAAATGTTGAAGATTGCGGAGGTCAAGAACAACGTTATGGGTCAGTTCCATAATGCCCTTTATTTAGGTGATATCCAGGAGCGTGTGACGATTTTGAAGAATGCTGGCCATTTGCCACTGGCTTACATCACCGCTTCAGTTCATGGGCTGCATGATGTTGCTGAGAGCCTAGCAGCTGAGCTGGGAGATGATGTTCCCACTCTGCCTGAAGGAAAAGTACCATCCCTTCTGATGCCGCCTCCACCTGTTATTTGTGGTGGAGATTGGCCCTTGTTGAGAGTGATGGGAGGGATCTTTGCCAGTGGACTTGATAGTGTGGGCAGGGGTGGTGCTGAGGATGAAGAGGAGGTTGGTGAAGGTGACTGGGGTGAAGAACTGGATATGCATGATGTTGAGAATATAGAAAATGGAGACTTTGCTGAAGTTTTAGCAGATGGAGAAGTGGATGAAGAGAATGAAGAAGAGGGAGGATGGGATCTTGAGGATTTAGATCTACCCCCTGAAGAAGATACTCCAAAAGCTTCTGTTAGTTCTCGTTCATCCGTTTTTGTGGCTCCAACTCCTGGTATGCCTGTCAGCCAAATCTGGATCCAGAGGTCTTCTCTTGCTGCTGAGCATGCAGCCGCTGGAAATTTCGATACTGCAATGCGGCTGCTAAATCGTCAACTTGGGATCAAAAATTTTGCTCCTTTGAAACCCATGTTCCTTGACCTTCATTCTGGAAGCCACTCTTATGTACGTGCATTTTCTTCTGCTCCTGTGATTTCCGTGGCTGTTGAAAGGGGATGGAATGAGTCATCTAGCCCTAATGTGAGAGGCCCTCCAGCTCTTGTGTTTAGTTTCTTCCAACTGGAAGAGAAGCTGAAGCTCGGTTACAGGTCCACAACAGCTGGTAAAATTTCCGATGCTCTCCGAACTTTTCTCAGTATTCTACATACCATTCCTCTGATAGTTGTTGAGTCGAGAAGAGAAGTTGATGAAGTCAAAGAGCTTATCATCATCGTGAAGGAATATGTTTTGGGTCTCAAGCTGGAGACTAAGAGAAGAGAACTGAAAGATGATCCAGTGCGTCAGCAGGAACTTGCAGCTTATTTCACTCACTGCAAACTTCAAACTCCTCATTTGAGGCTTGCCCTGCAAAATGCCATGACTGTTTGTTACAAGGCAAAGAATCTCAGCACAGCTTCCAACTTTGCCAGACGGCTCCTGGAGACTAACCCCCCTAATGAGCAACAAGCAAAAATGGCCCGACAAGTTGTACAGGCTGCTGAGAAAAACATGACTGATGCAGCTGAATTGAACTATGATTTTAGAAATCCATTTGTAGTCTGTGGGGCTACATATGTGCCAATTTACCGTGGTCAGAAAGACGTCTCGTGCCCCTATTGTGGTGCTCGTTTTGTTCCTAGCCAGGAGGGGCATTTATGTAATGTTTGTGAGCTTGCCGTGATTGGAGCTGATGCTTCCGGTTTGCTTTGTTCTCCAACTCAGATCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18366.p1 GENE.R_Transcript_18366~~R_Transcript_18366.p1 ORF type:complete len:1219 (+),score=289.68,COPI_C|PF06957.7|1.1e-167,Coatomer_WDAD|PF04053.10|1.4e-131,WD40|PF00400.28|8.8e+02,WD40|PF00400.28|0.0014,WD40|PF00400.28|2.8e-06,WD40|PF00400.28|5.6e-06,WD40|PF00400.28|0.0041,WD40|PF00400.28|0.00062,WD40|PF00400.28|1.7e+03 R_Transcript_18366:342-3998(+)
MLTKFETKSNKVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLRKKSVSPADDLLRLSQMNSDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHIKQDIIVSNSEDKSIRVWDVTKRTGIQTFRREHDRFWILAAHPEMNLLAAGHDSGMIVFKLERERPAFSVSGDTMFYAKDRFLRFFEFSTQRDTQVIPIRRPGSTTLNQGPRTLSYSPTENAVLICSDVDGGSYELYIVPKDAFGRGDVAQEAKRGVGGSAIFIARNRFAVLDKSSNQILVKNLKNEIVKKSTLPIAADAIFYAGTGNLLCRAEDRVVIFDLQQRIVIGELQTPFVKYVVWSNDMESVALLSKHAIVIASKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNKAIVIDATEYIFKLSLMRKRYDHVMSMIRSSQLVGQSVIAYLQQKGFPDVALHLVKDERTRFNLALESGNIQIAVASAKELDEKDHWYRLGLEALRQGNTGIVEYAYQRTKNFERLSFLYLITGNMEKLSKMLKIAEVKNNVMGQFHNALYLGDIQERVTILKNAGHLPLAYITASVHGLHDVAESLAAELGDDVPTLPEGKVPSLLMPPPPVICGGDWPLLRVMGGIFASGLDSVGRGGAEDEEEVGEGDWGEELDMHDVENIENGDFAEVLADGEVDEENEEEGGWDLEDLDLPPEEDTPKASVSSRSSVFVAPTPGMPVSQIWIQRSSLAAEHAAAGNFDTAMRLLNRQLGIKNFAPLKPMFLDLHSGSHSYVRAFSSAPVISVAVERGWNESSSPNVRGPPALVFSFFQLEEKLKLGYRSTTAGKISDALRTFLSILHTIPLIVVESRREVDEVKELIIIVKEYVLGLKLETKRRELKDDPVRQQELAAYFTHCKLQTPHLRLALQNAMTVCYKAKNLSTASNFARRLLETNPPNEQQAKMARQVVQAAEKNMTDAAELNYDFRNPFVVCGATYVPIYRGQKDVSCPYCGARFVPSQEGHLCNVCELAVIGADASGLLCSPTQIR*

Click here to download the sequence:
Link to NCBI Protein BLAST