Transcript Information: R_Transcript_183728.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16011369258525
Replicate 20
Replicate 30.20093629470309
Condition 2: 8 Hour
Replicate 10.64436486703277
Replicate 20.39229617265238
Replicate 30.1592246545648
Condition 3: 24 Hour
Replicate 10.40276854785446
Replicate 20.38693436650136
Replicate 30.57599222860256


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_183728.p1 GENE.R_Transcript_183728~~R_Transcript_183728.p1 ORF type:5prime_partial len:114 (+),score=9.73,zf-RVT|PF13966.2|9.7e-13 R_Transcript_183728:2-343(+)
GTGCGTGGTTTTACCTGGACACTTGCTCTTAATAGGATCAACACTAATGACATGTTGCAAAAGCGACGTCCGGGGTGGCGTCTCTCTCCTGATGTTTGTGTGATGTGTGGGGAGGGTGGTGAGTCAGCTTCTCATTTATTTTTGCACTGCAAGTTGGCGCGAGCTCTTTGGGCCAAGCTCTTTGGTGTAATAGTGCGATTGCTATACAAGCGCCGCAGTCTCTGCGGCGCTGTCCAAATTACTCACCTGCGTCATTCGCCCTCTCTTCATCTCTTCCTCTCAACCCAAATTAAAAACATGCGTCCTCTTTCCTCTCTTTCTCTCAGCCCAAACAAGCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_183728.p1 GENE.R_Transcript_183728~~R_Transcript_183728.p1 ORF type:5prime_partial len:114 (+),score=9.73,zf-RVT|PF13966.2|9.7e-13 R_Transcript_183728:2-343(+)
VRGFTWTLALNRINTNDMLQKRRPGWRLSPDVCVMCGEGGESASHLFLHCKLARALWAKLFGVIVRLLYKRRSLCGAVQITHLRHSPSLHLFLSTQIKNMRPLSSLSLSPNKQ*

Click here to download the sequence:
Link to NCBI Protein BLAST