Transcript Information: R_Transcript_183816.p1


Annotated TAIR IDAT5G33406.1
Annotated Gene NamehAT dimerisation domain-containing protein / transposase-related
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:12676126-12678403 | Reverse length=509
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9714122484426
Replicate 24.101602872021
Replicate 33.622460829159
Condition 2: 8 Hour
Replicate 13.9860710379236
Replicate 25.0962009777586
Replicate 33.9680265077125
Condition 3: 24 Hour
Replicate 13.2034149620052
Replicate 23.3852257832049
Replicate 35.2937704359007


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_183816.p1 GENE.R_Transcript_183816~~R_Transcript_183816.p1 ORF type:5prime_partial len:215 (-),score=40.51,Dimer_Tnp_hAT|PF05699.10|4.4e-12 R_Transcript_183816:17-661(-)
GGTCGTGTAACATTAAATGCACCAAATAATAAAGCTCCTTTGTGGGAATATCTATCTTATACGCTCTATAGTGATATTTGGCTTAATGAGAACCAAGCAAGAGTCCCTCCTCATAGAGATGGAGAAGTCTCTCAAGAAAGAATGAAATGCTTTCGAAGACTTTTCCCAAATGATGATGATTATGATAAGGTGTTGGATGAGTATGCTCATTTTTCTCTCAAGACGGGGCCTTTTTCGGATATTACTTCACTATCTAGGAGGGGCACAACCGATCCTAAGAGTTGGTGGGCTAACTTTGGTGCTCAATCACCTTTGCTACAATCATTGGCTTTTAGAGTGCTTGGCCAACCTACCTCTTCTTCTTGTTGTGAGCGTAATTGGAGTACTTACTCCTTTATTCACTCACTTAGGAGGAACAAGTTAACTCCAAAACGTGCCGAGGATTTGGTTTTTATCCACAACAACCTACGTCTATTATCAAGGGGCACCGATCAATATCATGATGGGAAGACAAAGATGTGGGATGTTGGTGGAGATGAATTTGATAATTTTGAGGACATGGGATTTTTGGAGCTTGCCGAGCTATCTCTTGATGAACCTGAATTGGAGAGTGTGTTTATCTCTGATGATATTGATAACATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_183816.p1 GENE.R_Transcript_183816~~R_Transcript_183816.p1 ORF type:5prime_partial len:215 (-),score=40.51,Dimer_Tnp_hAT|PF05699.10|4.4e-12 R_Transcript_183816:17-661(-)
GRVTLNAPNNKAPLWEYLSYTLYSDIWLNENQARVPPHRDGEVSQERMKCFRRLFPNDDDYDKVLDEYAHFSLKTGPFSDITSLSRRGTTDPKSWWANFGAQSPLLQSLAFRVLGQPTSSSCCERNWSTYSFIHSLRRNKLTPKRAEDLVFIHNNLRLLSRGTDQYHDGKTKMWDVGGDEFDNFEDMGFLELAELSLDEPELESVFISDDIDNI*

Click here to download the sequence:
Link to NCBI Protein BLAST