Transcript Information: R_Transcript_18408.p1


Annotated TAIR IDAT5G62460.1
Annotated Gene NameRING/FYVE/PHD zinc finger superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25075545-25077072 | Forward length=307
E-Value7E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 146.966272610411
Replicate 226.891415533182
Replicate 338.060425544376
Condition 2: 8 Hour
Replicate 138.989031108306
Replicate 257.10625208672
Replicate 367.09114540843
Condition 3: 24 Hour
Replicate 139.293170062801
Replicate 227.823557369651
Replicate 339.14531799772


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18408.p1 GENE.R_Transcript_18408~~R_Transcript_18408.p1 ORF type:3prime_partial len:260 (+),score=41.65,DUF3675|PF12428.4|1.2e-26,RINGv|PF12906.3|7.1e-13 R_Transcript_18408:340-1116(+)
ATGGTGAATGATTTCATGGTTTGCGTAGATAGAATAATAGCTTCAGCCTGTTTACATTCTGTCAATGAACAACAAGGCGAGCCCAATTCTCACAACACAGAAAGTGGGAAATTGTTATTAATCCAAATTGAGAAAGAAACAAGTGATAGTTTTGATTGTTCAACCAATGGAGGAGAAGGGAGTTCAAAGAAAAAAGAAGTGAGAGAGTGTAGGATTTGTCAAGAAGAAGATGATGAACTCTCCTTGGAATCCCCTTGTGCTTGTAATGGCACTTTAAAGTTTGCTCATAGGATGTGCATTCAGAAATGGTGCAACAAAAAAGGTGATATCACCTGTGAGATATGCAACCAGGTCTTCTCACCCGACTATTCGGTCCCCCCTCCTCGGCCTAATCCTGATGTCTTGACAGTTGATATCAGGCAAGCTTGGGGTCATCACTTTGGTTTCCGTGACCATGAACTGCTGGCGCTGGCTGCTGCTGAGCGTCGATTACTGGAATCAGAATACGATGAGTATGCCGCTGCCACTGCTGGCAATGTTACTTGCTTACGCTCAGTTGCTATCATTTTAATGTTTGTCTTGTTGATTCACCAAGTGCTGATGATTACGAGAGATTTTGGATTGATGCAAGGGTACTCGACCTTCTTTCATTTTCAGGTTTCTGTCCTTCAGCTTGCTGGCTTTCTTCTTCCATGTTTTGTCCTGGTCCGCTCATGGTACATTTTACACACCAGGAGGAGGAGACAGGTTTGTTACTTGCATTTATTTTACCTAGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18408.p1 GENE.R_Transcript_18408~~R_Transcript_18408.p1 ORF type:3prime_partial len:260 (+),score=41.65,DUF3675|PF12428.4|1.2e-26,RINGv|PF12906.3|7.1e-13 R_Transcript_18408:340-1116(+)
MVNDFMVCVDRIIASACLHSVNEQQGEPNSHNTESGKLLLIQIEKETSDSFDCSTNGGEGSSKKKEVRECRICQEEDDELSLESPCACNGTLKFAHRMCIQKWCNKKGDITCEICNQVFSPDYSVPPPRPNPDVLTVDIRQAWGHHFGFRDHELLALAAAERRLLESEYDEYAAATAGNVTCLRSVAIILMFVLLIHQVLMITRDFGLMQGYSTFFHFQVSVLQLAGFLLPCFVLVRSWYILHTRRRRQVCYLHLFYLV

Click here to download the sequence:
Link to NCBI Protein BLAST