Transcript Information: R_Transcript_18415.p1


Annotated TAIR IDAT5G16270.1
Annotated Gene Namesister chromatid cohesion 1 protein 4
Annotated Gene Symbol(s)ATRAD21.3, SYN4
Annotation TypeOrtholog
Chromosome Positionchr5:5316783-5322330 | Forward length=1031
E-Value2.7E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.989069275696
Replicate 29.9606449174918
Replicate 311.105186386615
Condition 2: 8 Hour
Replicate 18.932443532755
Replicate 29.1411284966767
Replicate 312.720648722767
Condition 3: 24 Hour
Replicate 112.011524741535
Replicate 210.163063296778
Replicate 312.082012987167


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18415.p1 GENE.R_Transcript_18415~~R_Transcript_18415.p1 ORF type:complete len:1250 (+),score=360.52,Rad21_Rec8_N|PF04825.9|3.9e-37,Rad21_Rec8|PF04824.12|3.8e+03,Rad21_Rec8|PF04824.12|4e+03,Rad21_Rec8|PF04824.12|1.2e-17 R_Transcript_18415:660-4409(+)
ATGTTTTACTCACAGTTTATATTGGCCAAGAAAGGGCCTTTAGGGACTATATGGATAGCTGCACATTTGGAACGGAAGCTTAGGAAGAATCAAGTTGCTGATACTGATATTGGTGTCTCTGTCGATTCAATATTGTTCCCAGAGGTACCAATTGCACTCCGTTTGTCTAGCCATTTGCTGCTTGGTGTTGTTAGGATATATTCAAAAAAGGTGAATTACCTCTTTGACGATTGCAGTGAGGCTTTGCTTAAAGTCAAGCAAGCGTTTCGCTCCACCGCAGTTGATTTGCCTCCTGAACAGTCTAAAGCACCATACCATTCAATTACTTTACCAGAGACTTTTGATCTGGATGACTTTGAGCTGCCAGACAATGAGATATTTCATGGGAACTTTGTTGACCATCATGTTAGTACAAGAGAGCAAATTACCCTCCAGGATACTATGGATGGTGTGGCATTCCCAACATCGCAATTTGGGCCTGATGAGCGATTTGGTGATGGTGATGCATCTCAGATTGGTTTGGACCTTGATGAGGATTTATTTTTGGACAAGGGTGAAGCTGCAGGAACAAGTGGAGTTATAATGGACATGGATGTTGAACCTCAGACATCTGTAAAAGCATCTTCACCTTCCAAAGGTGATGAACATACTGAAGGCATTCCAGAGCCTCCGTCAGCTTCTCCTGCTAATTACTTCAGTATCCAGGCTCCATCCACCCCAGGGCTAATGGAAGAGCCAAACTTGCCTAGCGCTGAAGAAGCTCTAGTCAGTGATGACTATATGGATGAGGACCGTAACCCACCAGAGGTAGCACCAAAGGAAGTGTCTGGACCTGAGTCAAGTCAGCCAGAACCTTCAAATTTTAGTAATGTTAATTTTCATGCCAATAAGAATTGTCAGGACCAGAGTGAGGTGGAGAATGAAAAAGGCAGGACATTAGGTGTCGAATGCTCAAATGAGACCGTGGAACCTATCTCAACTGGTACTGTACAGCTGCTTACTTCAAGTGAGCATGTTGAGGCAACCGATGGTCCGGATAATATAGGTAATATTGTTGATGGTAGTTCGCTCAAGGGTGAAAGTATGCAACTTGATATTCAATCTAAAGGACTCTCTGAAGATAATGAAATAAGCATCAACCCAGGATCCATGCCTTCGCCTCAGATTGCATCTGTTTCTGAGGGCCATAATGCATTTTCAGGCAATGATAAAGCTGACTTAAATGGCGTATATCCTGTCATGCTTAATATGAATTCTGAAAATGATAAGTCATCAGCTGGTTCTGGAGTCCCTACTGGAGAAACTGAAATGTTTATTGTCAGTAGTGTCTCTGAACCTCAGAATGCTGGTCAGCCTTGTCTAAACCCTGAAATTCCTGGGACCTCTGATCCCAATACAGACAAAAGGCTCTCAGATCTTTCCATACCAGTCCTTCAGGCTTGCAATTCGTATGTCCAGCATGGGTGTAATGGAGTTGATAGTTTGCTTGACGCCTCCAACCAACCTGGCGGAAATGATGGTCTGTCTTCATTGGGGACATCTGGAAAGGAAGACACAACAAACATTTCTGGTATTTCTGTGGAAGTTCAAGATGCAATGAAAACAACTATGAACGCAGACCAGATGACTCATGAAGTTACTGATGCAGATAGTAGTTACTTGGATGGGAAACCAGGCAATGTGACATCAGAAGAAAATAATTTAGAAAAAGAAAATAACTCCAGAATATCTGATTTTTCTGCCCCTGAAAAGTTGCTTTCTATGCCTCATCTTGTTGGTGGTCAATCTGGTGAACTTTTTGTTGAGTGTACTCCTGCTAAAGAAGATTTAGCAGAGGGGGCTGGTGATGCTACTGTGGAAAATATTGTATCTGGGAAGAAAAGAAGTTACACGGAAAGTACTTTGACCATTCAAAGTCTAAATTCAGCTGAATCTTCTGGTGCTCAATCTAAAAGATCTGTAGAATTTGTTCCTGATGATGATGATCTGCTTTCTTCCATTTTAGTTGGTAAAAGGTCAATGACCTTGAAAATGAAGTCTACACCACCTGTTACCGAGACAGTACGTGCAAAGCGTCAGCGTGTTGCTGTCCGCGCCAGTGCTCACAAGAGGAAGGTGCTCATGGACGATGCTATGGTCTTGCATGGCGACATGATACGCCAACAGTTAACGGATACTGAAGATATACGTCGTGTGCGAAAGAAAGCTCCCTGTACACATCTTGAAATTTGGATGCTTCAGAAACAATTCTTGGAGGATGAGATTTTCAGCGAACCTGTATTTACAGGGATGTCAGGTTCCTTGATCTCTTTGGATACAGAGGCATTTGATCTGAGAAGAATTGCAATCGTTCAGGAGGATGTAAGCAAGGGAGCAAACGAGGTGGACACCTCTAAAAAGCCAACACTAGGTGAAGAAGCCGAGCATGTGGGCAATTGTATGTCTTCCACTGCCAGACATGATGGTGAGCAAGAACATGGAGGAATCTTGGAGAACCCGAGTCATCAAGAATCTATCTTATGTGCCGATGGTGATACCCTACAGAAAGAGACAAAGGCAGCAGATGATGAAGTCATCAAAGAGGTGTCAGGCGAAAAGGTTGAAATAAAAATTGGTGGTGAAAGAGTTTCACTTGGTGAAAATATGGGCTCTGAGCATGCCGTTGCATCGAGTCATACTTCTGAAGCCAACTGTAACTCATCAGATGGCGCAATAGCCAATTCATCTCATCTAAACAAAAATGGTGATGTAGTTGTGCCTGGCCCTGATGATGCATCATGCTGTTTAATGGATCCAAGGCATGATTTGCAATCTACATGGGGAGATGCTTCTGCCATGGAGGATGGTGACCGACCAAGGATTAGGGATCAGGAAGGAGCAAATTTGCTTGAGAAATTTGATTCAGATGAAAGATTAGATGCAAAATTTTCAGAGGAAGCCGAAAGCATTGACAATGGTATACCACGGGCAGATGTCCAGGACCATTTCTCAGTGCCTCGTGAAGGTGGGGCTTGCCCAACATCAGATCAGGTCATCGATGAATGTCAACTGACTGAAACTGTGCCTTTTCAAGATGGGGTTTGCACAACCTCAGATCAGGTTATGGATGAATGTCAAGCGACTGAATCTTGTCCTGTGACTGTTCATGATGAACTTCTTGCTTCTGAACAAAGACATGATGGTAGCGGCCTAACTTCAAACAATCTTGGTGATGTAGATTACAAGTTAGATTCTTCATGTGCAGTAGAAGCTGATTTAAGCTCCCAAAATACCTTGTTGAAAGAAAGAGAGAATCCGGAGTACTGGGAAGCTGATGCTAAGATTGACAAGGATTCAAGAAACATACATACGGACTACAATTATGCTGGAGATCATGCTGAATTTGGGATGGATACCATTGAGCATGACACAGATTTTCTCAATGTTGATGATGATGAGGTTGCTGAAGATTATGAAAGTGATATGCCTAATGCTGAAGAGAAGCGGGTTCTAGACAGCACTGGCTGGTCTGGTCGTACCAGGGCTGTTGCCAACTATCTTCAAGTCCTCTTTGAAAAGGAAGCCAACCATGGAAAACAGGAGGTTTCCCTCGACAGCTTATTAGCTGGAAAAACTCGTAAGGAAGCATCAAGAATGTTCTTTGAGACATTGGTCCTCAAAACTAAGGATTACATCCATGCACAGCAGGAGAACTCTTTTTGTGACATTCGAATAAAGCCTCGAGGAAAGCTCTTGAAATCAGATTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18415.p1 GENE.R_Transcript_18415~~R_Transcript_18415.p1 ORF type:complete len:1250 (+),score=360.52,Rad21_Rec8_N|PF04825.9|3.9e-37,Rad21_Rec8|PF04824.12|3.8e+03,Rad21_Rec8|PF04824.12|4e+03,Rad21_Rec8|PF04824.12|1.2e-17 R_Transcript_18415:660-4409(+)
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEVPIALRLSSHLLLGVVRIYSKKVNYLFDDCSEALLKVKQAFRSTAVDLPPEQSKAPYHSITLPETFDLDDFELPDNEIFHGNFVDHHVSTREQITLQDTMDGVAFPTSQFGPDERFGDGDASQIGLDLDEDLFLDKGEAAGTSGVIMDMDVEPQTSVKASSPSKGDEHTEGIPEPPSASPANYFSIQAPSTPGLMEEPNLPSAEEALVSDDYMDEDRNPPEVAPKEVSGPESSQPEPSNFSNVNFHANKNCQDQSEVENEKGRTLGVECSNETVEPISTGTVQLLTSSEHVEATDGPDNIGNIVDGSSLKGESMQLDIQSKGLSEDNEISINPGSMPSPQIASVSEGHNAFSGNDKADLNGVYPVMLNMNSENDKSSAGSGVPTGETEMFIVSSVSEPQNAGQPCLNPEIPGTSDPNTDKRLSDLSIPVLQACNSYVQHGCNGVDSLLDASNQPGGNDGLSSLGTSGKEDTTNISGISVEVQDAMKTTMNADQMTHEVTDADSSYLDGKPGNVTSEENNLEKENNSRISDFSAPEKLLSMPHLVGGQSGELFVECTPAKEDLAEGAGDATVENIVSGKKRSYTESTLTIQSLNSAESSGAQSKRSVEFVPDDDDLLSSILVGKRSMTLKMKSTPPVTETVRAKRQRVAVRASAHKRKVLMDDAMVLHGDMIRQQLTDTEDIRRVRKKAPCTHLEIWMLQKQFLEDEIFSEPVFTGMSGSLISLDTEAFDLRRIAIVQEDVSKGANEVDTSKKPTLGEEAEHVGNCMSSTARHDGEQEHGGILENPSHQESILCADGDTLQKETKAADDEVIKEVSGEKVEIKIGGERVSLGENMGSEHAVASSHTSEANCNSSDGAIANSSHLNKNGDVVVPGPDDASCCLMDPRHDLQSTWGDASAMEDGDRPRIRDQEGANLLEKFDSDERLDAKFSEEAESIDNGIPRADVQDHFSVPREGGACPTSDQVIDECQLTETVPFQDGVCTTSDQVMDECQATESCPVTVHDELLASEQRHDGSGLTSNNLGDVDYKLDSSCAVEADLSSQNTLLKERENPEYWEADAKIDKDSRNIHTDYNYAGDHAEFGMDTIEHDTDFLNVDDDEVAEDYESDMPNAEEKRVLDSTGWSGRTRAVANYLQVLFEKEANHGKQEVSLDSLLAGKTRKEASRMFFETLVLKTKDYIHAQQENSFCDIRIKPRGKLLKSDF*

Click here to download the sequence:
Link to NCBI Protein BLAST