Transcript Information: R_Transcript_18424.p1


Annotated TAIR IDAT1G65020.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:24154523-24156511 | Reverse length=319
E-Value5.9E-145
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 164.365704419271
Replicate 250.833148376301
Replicate 356.451279029527
Condition 2: 8 Hour
Replicate 144.195849115306
Replicate 253.929185616977
Replicate 356.028346094507
Condition 3: 24 Hour
Replicate 151.53068185785
Replicate 253.806637788777
Replicate 350.145205784223


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18424.p1 GENE.R_Transcript_18424~~R_Transcript_18424.p1 ORF type:complete len:323 (+),score=49.19,NERD|PF08378.7|5.1e-10,NERD|PF08378.7|2e+03 R_Transcript_18424:380-1348(+)
ATGTGGATAGAGCTGCTGTGTGGTCTTGTTCTGTATAAAGTACTCCGTGTCTTCTTCGCCAACGATGACGTTTTAGATGTCGAAACCTCCGACTTTAACGCTTTATTCTCCGTCGCTGCGAGATTGGAGAAGCTGTACGGGGGTAAGGTCTATGTCGGACTTCTACTCCCCGATGCCGATTCTGGCTCTCGCCAAAATATCGATTTGGTTCTTGTCACTAAAGGGGAGGTTGTGGTGATTTGTGTCAAAAACATGGCTGGGTTTGTTTCAATCAACTCTGATAGAAGTTGGCGTTGTATCAGTGATCACAAACATAAGGAGGAACATCATCCAGATCCTGTAGCAGAAGCCCGATGTCAAGCTGCTGTTTTAGAAGCATATCTTGAACAAAGAGGAGTTGCTCTTCCGGAAGGATATTTATCTTACAAAGTTATAACTTCCAACCCGAAGTTTCGATCACTAAATCCAGATCACTTCCCACCAGAAGTTATACAATATGATCAGTGGGTGCAGATAAAACCAGAATCAAAAAGCATGCTTTCTGGATGGATCAAAGGGGCCTTTCGCACTGTAAAGAAAGATATGCAGGATTCTATACAGCAACAGCTTCATTTTGTTCTTAGTACAGCTCCAATGTGGGATAGGCTGGAGCTCAAAGGCAGCAAATTTGTTCTAGGAGAATTCATGGAGTTTAAAGGAAAGCACGATGATGTGCAAGCTTTACAACATATTAAAAGATCCAAAATTGGTCGGATGATTATCAAGAAAACATCTATGTTTGGCTTAGCTCCAACAAAACTTCAAGTTTTGTATTCTCCTCGTGATTATCGGAGTGAAGGAGCTTCTGCTTCTGATTGGAAGGAGGTGACTGTCAGGTCAAGTACGGAGGTTATCTTTCATCCGCAAAATTCCAAGAAAGTTCGCAAATTCAAGTTATCCACAGTTACTTCTCTTACACTGAGTGCGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18424.p1 GENE.R_Transcript_18424~~R_Transcript_18424.p1 ORF type:complete len:323 (+),score=49.19,NERD|PF08378.7|5.1e-10,NERD|PF08378.7|2e+03 R_Transcript_18424:380-1348(+)
MWIELLCGLVLYKVLRVFFANDDVLDVETSDFNALFSVAARLEKLYGGKVYVGLLLPDADSGSRQNIDLVLVTKGEVVVICVKNMAGFVSINSDRSWRCISDHKHKEEHHPDPVAEARCQAAVLEAYLEQRGVALPEGYLSYKVITSNPKFRSLNPDHFPPEVIQYDQWVQIKPESKSMLSGWIKGAFRTVKKDMQDSIQQQLHFVLSTAPMWDRLELKGSKFVLGEFMEFKGKHDDVQALQHIKRSKIGRMIIKKTSMFGLAPTKLQVLYSPRDYRSEGASASDWKEVTVRSSTEVIFHPQNSKKVRKFKLSTVTSLTLSA*

Click here to download the sequence:
Link to NCBI Protein BLAST