Transcript Information: R_Transcript_184534.p1


Annotated TAIR IDAT5G55960.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22662726-22664762 | Forward length=648
E-Value3.7E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2350564434349
Replicate 20.5713279024843
Replicate 30.77914073456301
Condition 2: 8 Hour
Replicate 10.1665705098452
Replicate 20.91268905474227
Replicate 31.1113230992074
Condition 3: 24 Hour
Replicate 10.62470223748855
Replicate 20.75017887382916
Replicate 31.340063552259


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_184534.p1 GENE.R_Transcript_184534~~R_Transcript_184534.p1 ORF type:internal len:147 (+),score=23.84 R_Transcript_184534:1-438(+)
CAAGCTCTCAACAACTCAATCTCAGGGGTGCTATTAGCCACAGCAGAGATAGCATTTTTTCAGTGCTCCTTCACTTGGCTTCTTTGCAGGCTTTTCTCTATACACTTTGTGTATATGTCAACTATGCTTGCATTTATAAGCCCTTTGCTCCCTATTTTTCCACCTTGGCTACCAACAGTTCCAGGAGCTTTGCAATTAGTGCTTGATGGGAGATATGTTTTGGCAATCAGCTTTTGTGTAACTCATTTTGTTGTGATGGATTATGGGGCCTCTGAAATTGCTGAATATGTGCCTGGTTATAGCACTTATCTCACTGGGGTTAGCATCATTGGAGGAATGACTTTGTTTCCCTCAGCATTGGAGGGAGCTATAATGGGACCTCTGATAACCACTGTTGTGATCGCCCTTAAGGACTTGTATGCTGAATTTGTGTTGAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_184534.p1 GENE.R_Transcript_184534~~R_Transcript_184534.p1 ORF type:internal len:147 (+),score=23.84 R_Transcript_184534:1-438(+)
QALNNSISGVLLATAEIAFFQCSFTWLLCRLFSIHFVYMSTMLAFISPLLPIFPPWLPTVPGALQLVLDGRYVLAISFCVTHFVVMDYGASEIAEYVPGYSTYLTGVSIIGGMTLFPSALEGAIMGPLITTVVIALKDLYAEFVLN

Click here to download the sequence:
Link to NCBI Protein BLAST