Transcript Information: R_Transcript_184592.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33338741469806
Replicate 20.38349407153056
Replicate 31.045969753249
Condition 2: 8 Hour
Replicate 11.1180760249884
Replicate 20.81683586634468
Replicate 30.99460880111709
Condition 3: 24 Hour
Replicate 10.73381118992661
Replicate 21.0070894470583
Replicate 30.69960699912457


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_184592.p1 GENE.R_Transcript_184592~~R_Transcript_184592.p1 ORF type:complete len:219 (+),score=31.46,RVT_1|PF00078.23|1.1e-28 R_Transcript_184592:2050-2706(+)
ATGATGAAGATTGATATACAAAAAGCATATGATAGCTTGGAGTGGAGTTTTTTAAGGCAAGTGATGGTGGAAATGGGGTTTCCTCCAAGATTTATTCAATGGGTAATGACTTGTGTTTCTACTGTTTCATATGTGTTGTGTATTAATGGTGATTTGCAAAAACTCATTGAGGCTAAAAGAGGGCTTAGACAAGGAGATCCACTATCTCCTTTTTTATTTGTCATAGCCATGGAGTATCTTACTAGGTGTATGAAGGGTTTGAAAGAAAAACAGGGTTTCAAGTTCCATCCAAAGTGCAAGAAAGTGAATTTGACTCACTTATGTTTTGCGGATGATTTAATGTTATTTTCCCATGGAGATCTACATTCACTGAGATTGATTAAGGAGGTTTATAGTCATTTCTCTCATGCTTCAGGACATTATGCCAATATGGGCAAAAGTTCTATATATTTTGGGGGAGTCTTTGAGGAACAGCAAGAGGCTATTGTGCAGGAGAGTGGATTCAAGAAGGGTGAGCTACCAGTGAAATATCTTGGAGTTCCCCTAACAAGCAAGAAGATTACAATAAATCAATGTAAGCCAATTTTGGAGAAAATTTTGGGGAGACTTAATTGTTGGTCTGCAAGTTTCTTTCATATGCAGGTAGACTTAAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_184592.p1 GENE.R_Transcript_184592~~R_Transcript_184592.p1 ORF type:complete len:219 (+),score=31.46,RVT_1|PF00078.23|1.1e-28 R_Transcript_184592:2050-2706(+)
MMKIDIQKAYDSLEWSFLRQVMVEMGFPPRFIQWVMTCVSTVSYVLCINGDLQKLIEAKRGLRQGDPLSPFLFVIAMEYLTRCMKGLKEKQGFKFHPKCKKVNLTHLCFADDLMLFSHGDLHSLRLIKEVYSHFSHASGHYANMGKSSIYFGGVFEEQQEAIVQESGFKKGELPVKYLGVPLTSKKITINQCKPILEKILGRLNCWSASFFHMQVDLN*

Click here to download the sequence:
Link to NCBI Protein BLAST