Transcript Information: R_Transcript_18480.p1


Annotated TAIR IDAT3G55160.1
Annotated Gene Nameunknown protein; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2428, death-receptor-like (InterPro:IPR019442); Has 357 Blast hits to 330 proteins in 163 species: Archae - 0; Bacteria - 0; Metazoa - 144; Fungi - 118; Plants - 50; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20445629-20452400 | Reverse length=2130
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9284970322955
Replicate 21.6612457472236
Replicate 32.1849503553253
Condition 2: 8 Hour
Replicate 12.3678638630303
Replicate 22.5850162304316
Replicate 32.9840449986922
Condition 3: 24 Hour
Replicate 13.0475858385787
Replicate 22.2976247723371
Replicate 33.8099037608841


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18480.p1 GENE.R_Transcript_18480~~R_Transcript_18480.p1 ORF type:complete len:2275 (+),score=374.74,DUF2428|PF10350.5|3e-78,DUF2428|PF10350.5|5e+03 R_Transcript_18480:199-6825(+)
ATGTCAGCAAAATGGCGTGCCTTACAACATCGCCATCGTTATACATACAATGCTGTCATTTTTCCGCAGCCTTATTTAGATTCAATAACCCATTTTCCTGCACATGAATTATGTCAAAAATTCTACACTGTTTTAAAAGAATTTGTTGCTCTTAATTCTATATATGCCCAAGTTAATTATGTCAAGAATGTAGCAACTTCATTCAGTAACTTGTTAGGGGCAGCTAGTGGTGAGAATTCAGTTAGTTTAGCAGCAAAGTTGTATTTAGAACTTTTGTTTTTTGAAAACTCACTGCCTTTACATAGGACTTTGGTTTCGGTTCTTTCGAAGAATCAAAAGTTTTGGGATTTGATTAGGGGTTGTTTTAAAGCTCTATGTGAGGAATATGGTGCATTGTGTGGGAGAAAAGGGAAGAGGTTTTGCGTGTCGAGGGCTGCATTATCGATGATGAGCACACCTAAGTTGGGGTACCTGGTGGAGGTTGTGGAAGATTGTTGTGTGTTGGTGGGGTTAGATATTGTTACTGGATTGAATAGTGTGGTTACTGAGACTGAAGAATTTGCACGGCCTTCGCCCCTCGTGATGGAGCAGTGCCAAGAGGCTTTATCTTGTTTGTATTATTTGCTTCAGCGGTTTCCTTTGAAGTTTGTTGATGTGGATTATTCTCAAAATGGGTTGGTTCTGAAAGATTCTGATCTTTTGGAAATGGTTGTGAGGGTGATTCTGTGTATACTGAAATCTGTTGCTTTCTCGCGGGACTGTTTCGTGGCGGCTGGTGTTGCCTTCTTTGCTGCTCTTCAGGTATTGCTTAGTCTTGAGGAGCTTGGGCTACTTATATGGGAAGGTGTTTTTGAACAGAAAGTTTGTAGTTTGGTTGGTAGTGTTGATGTCGCGCACATGAATGCTGTTAAAAGGGTTCCATATAAGGGGGATTTGTGCTTTGAACTCAGAAGTTTTGCTCCCCTGAGTAGACTCTGCTTGTTACGAGGGATTCTTACTGCTGTTCCCAGAACAGTGCTGAATTTCCATTTCGTTGTAGAAAGAGAGGAATCTAGTGAGACTTGTCCTGATAAAAATGACGGGATCAGCCCAAAAAGTATATTGTATGATGGTATATTGCCAGAGCTTTGTAATTATAGTGAAAATCCAATTGATAGCCATTTTAATTTCCATGCTTTGACCGTGATGCAAATTTGTTTGCAACAGATCAAAACATCTATAATGGCTAATCTTGGTGATGTGAATTATGATTTTAAGCCCATATCAGAGGATCTAGGAGCACGTATACTAAGAATTATATGGAATAACCTGGAGGATCCTCTAAGCCAAACAGTGAAGCAAGTTCATCTTATTCTTGACCTCTTCTTAGACATAAAATCCACTCTTCATCGAGGTGATGATCCTGTAATAATAAATTCATTGTTACAGAAGATAGCAGGTGATCTTCTTCATCTCGGTCCTCGGTGTAAGGGTAGATATATTCCTTTAGCATCTCTCACTAAGAGGCTGGGAGCAAAAAATATTCTTGTTATGAGTCCCAACCTACTATTTGAAACAGTGCAGGCATACATTGATGATGATGTGTGCTGTGCAGCCACTTCATTTTTGAAGTGTTTTCTTGAGCGTTTGCGTGATGAGTGTTGGGCAAGCGACGGTGTTGAAAGAGGGTATGACATTTATCGAGGTTATTGTTTGCCCCCTCTCTTATATGGACTTGCTTCTGGGTTCTCAAAGTTGCGTTCAAATTTGAACACCTATGCTTTGCCAAGCTTACTTGAAGTGGATGTGGATAGTATATTTCCTATGCTCTCTTTCATTTCAATTGGTGTTGAAGCTAAGATCGAGTTGGTGTATCCTGAACTCGGTTGTGCTGACATGGCTTTTAGTGTGGAACAGAAAGTGGCTGTTTTGGTCTCATTGCTTAAAGTATCCCGTTCGCTCGCTCTCTTTGAAGGGGATATCGATTCAAGTCATATTCCTGTAGTTCCATCAAAAAATTGTCCAAGGGTGGAAGAAGATGCATATATACACATAAAGGGGATTCGCGTTGATATCCCAGTCAAATGGCTTGCTCTGGCATTGACTCATGTAGATGAATCACTGCGGGTGGATGCTGCCGAGTCACTTTTCTTGAACCCTAAAACAGCCAGTCTTCCATCCCCCTTGGAACTCAATCTCATGAGAATGTCAGTACCTTTGAACATGAGGTGTTGCTCCACAGCTTTTCAGATGAAGTGGGCTAGCTTGTTTAAGAAGTTCTTAGCCCGTGGCCGTACAGCCTTGGAGAGGCAATTCAAACAGGGTACATGGCTACCGTCAGACTGCTTGAATAATGTTGAAGCTTCTGTGTCTAACAGAACTGATGAAAGTAGTGTTAGCCGAGCAGAAGAACTCTATCAGTTTATGAAGTGGTTTAGTTGCTTTTTGTTTTCTTCTTGCTACCCTTCTGCTCCTTATGAGAGAAAAATCATGGCCATGGAGCTAATTATGATAATGATTAATGTGTGGTCCATTGTACCTCCATCGCAAGGAAATGATGGATCTTTTTCCACTGAAGATCTCTATCCTTACAATGAAGGACTTACTAGACCTGATTCAACCATGCTGTTGGTTGGTTCCATTATTGATAGTTGGGACAGGTTAAGGGAGAGTGCTTTCCGCATACTAGTAAGTTATCCCACCCCTCTTCCTGGAATTTCCAGTGAAGACATGGTTCATGAAGTAATACTATGGGCGAAAAAGTTAGTTTGCAGTCCACGTGTCAGAGAAAGTGATGCTGGGGCTTTGGCATTACGGCTCATATTTCGTAAGTATGTTATGGAGCTTGGTTGGATGGTGCATGCATCAGCCAGTGTTATTTTTCACAAGTCAGAGCCTGAAAACTCTAATGGAAATTGTCAAATTTCTAAGTCCAGGTTCCCCATGATTGAATATATAAACTCACTTATTGATTGGTTACAAGCTGTTGTAGAAGAAGGAGAGAAGGATCTCCTGGAAGCCTGCAAGAATAGCTTTGTTCATGGTGTCTTGCTTACTTTGAGGTATACATTTGAGGAATTGGATTGGGATTCTGATGTAATTAAGTCCAGCATCTTTGAAACGCGACATGCACTGGGGAAGCTCTTAGAGCTGATTATGCGTATAACCTCATTGGCTCTTTGGGTGGTTTCTGCTGATGCTTGGTATCTGCCTCAAGATATGGATGAGATTGAAGAAGATGGTTTGCTAATGGAAATTTCAAATGAGATGGCAATGCAAGCATCTCCACTGCAACATGAAGAAAAAGATACAAAAGTCAAGCAAGATGCAAGGCCAACAGAGCAGATTGTCATGGTTGGGTGCTGGCTTGCCATGAAAGAGGTCAGTCTTCTTCTTGGAACAGTTATAAGAAAAATTCCCTTACCGACTTCCACATCTTCTGTTGGCAACGGGGCTGCTGATGCTGCAGGGGACACTCTCACTCCAACTTCAGATGCAGTACTTGATGTAAACCAATTGGAGGTCATTGGGAACCATTTTTTGGAAGTTCTCCTGAAAATGAAACATAATGGTGCTATTGATAAGACCAGAGCAGGATTTACAGCTCTTTGCAACCGTTTGTTATGTTCTGATGATCCAAGGCTTTGTCAGCTTGTAGACTCTTGGATGGAGCAGCTCATGGAGAGAACGGTGGCCAAGGGACAAACTGTTGATGACTTGCTAAGAAGAAGTGCTGGCATCCCTGCGGCATTCAGTGCTTTCTTCCTCTCAGAACCACAAGGTGCACCAAAAAAGCTGCTTCCGCAAGCACTACGCTGGTTGATAGATGTGGCCAGTGGGTCATTGCTAGATCAAACTGAACCAAACAATGTAGTTGGTGAACTGCTGAACAACTTAACTGCGGTGTCAGATTTGACAGATGCATGCATGCAGATAAGTAAAGTTAGTGCAAATTTAACGTCATCAAAGGTTCGTGTTGAAGGCGTCATCCCCACTGTGCATGCTTTCAATGTTCTCAGAGCTGCTTTTAACGACGCCAATTTAGCAACTGATACATCTGGGTTCTCTGCTGAGGCGATGATAATTTCCATACGTTCTTTCTCTTCTCCACATTGGGAGATCCGTAACAGCGCATGTTTGGCATACACAGCCTTGGTTCGCCGGATAGTTGGCTTCCTGAATGTACACAAACGGGAATCTGCAAGGCGTGCAATCACCAGTTTGGAATTCTTTCACAGGTATCCATCATTGCACTCCTTTGTATTTGATGAACTGAAAGTTGCCACTGGGTTGTTACTACATGGAAAGTCAACGTCTAATCTAGCTAGAATTGTGCATCCAAGTCTATGTCCTGTGTTGATCCTGCTATCTAGGCTTAAGCCTTCACCTATTGCTAGCGAAACGGGGGACCATCTAGATCCTTTTCTGTTCATGCCATTTATACAGAGGTGCTCAACCCAAAGCAATATGCGCATTCGAATACTTGCATCAAGAGCTCTGACGAGTTTGATATCTAATGAAAAGTTGCATACTGTGCTGCTTGAGATTGCCTCAGGGCTGCCATCTTCTGGCAATCAACCAGAAAAGGCATCAGTTACATCATCTCAGTCTGGTGAATGCTTCCGTAGTTCTTTTAACTCCATTCATGGGACACTCTTGCAGTTGATTGCCCTTCTGGATGCCAATTGTAGAAACCTTGCCGACTTCTCATCAAAAGATTTGATCCTTGATACCCTAATTAAGGCTCTTTCTAAGTGTTCGTGGCTTGGGGTTCCCGCCCTTTGCCCATGTCCCACTCTCAATACTTCTTTCCTAAGGGTACTTGATCACATGCTAAGTATTGCGGGATCACGCCAAGCAAGTGAAAAATATGATGTTATTTGCAGCCTACTTTCACAGTTATCTTCAGATTGTTTAGCTGCAGAATCATCTAGCAAGTCATCTTTCCATGATCCAACTGCAGCGGAACTTTACAAACAAGCTGCAATATCATATTTACACTGTATATTTCTCTGTGAAGAACCTGCTGAAAAAATACTTAAAATGCCATATTGGTCTTCTGCTGATTTGCCAATGACAAAACCTTTCGTAAAGGATGGTTGTGGTGATGTTGAGGGAAAGCTTGTCAGTTACATGTCAGATGCTTCATATGAAGTACGCCTTGCCACATTCAAGTGGCTGCTCCGATATATAAAGGCTGCTGTGATTGAATTTGATGATAATCGAGCTACCAGTGAGGCTGGAGCTATTGCTCTTTGGGCAAAGGCTAATTTACAACCATCCTTGCTTAGAATTTTGGCCTTGGAAACTCACCATAAATGTGTATATTATATTCTCAGAATTGTTTTCTCTTGGAACCTATTGCAGTTTCAGAAGGCAACTGATACAATATGTGGAGACAGTATATATATTGGAGAGATGGACATTGGATCAGTTCTGCAGTTCTGGAATAAGTTGGTTTCTATTTATGAGATTTCAAGGCATAGAAAAACTCTGGAAGTACTCTTAGGCTGCTTTGGATTATGCGTGAAGTGTTTTGCAAATTTACTTGGGAGCGTTCTGCACTCTGATTTAAGCAACTTGAAATCCCCCACATCTGATGAAGTCAGCAGATGCACCCTCTTATATGACCATATTAGGTGGTTTGTTTTCCTAGTCAAGGAATATACTGATGCCTCCCAACAATATAGCTTGCGCAAAGCTGCTGCTGAATCGGTGGTGGCATCTGGATTGCTAGAGCAGGCTCAAGTAATTGGCCATTCTGTGATCAATAATGGAATTCCTTCAGCGGATTCTGAATCTCGATTTGAATCGAAGAATTTTGTTAACATGTTTGCTTATTTGATCTTGGAAACCTGGTTCACTTGCATCAAGTTGCTGGAGGATGAGGACGTTGACATCAGAAAAGAGATCGCCTTGGATATACAGAAGTGTTTTCCTGAACAATTTAGGAACCGATTTCATGCAGGATTAGTGCTTTCCCAGGTGGAAAAGGTAATTGAATTGAGCTTTGAGTTCCTTACATCAATATTTGGCCACTGGGACAGGTACTTCGATTATCTTTTGAAACGGGTCCTAGATGTAGCAGGCTATGATGTTGCACACCAAGGTGATCTCGTCAGGCGGGTTTTTGACAAGGAGATTGATAATCATCATGAAGAGAAGATGCTTATTGGTCAGCTTTGCTGTTCCCATCTCGAGACACTCGAGGTGTCAAGATCTCAACAACCTGAATTTCGAAAATTTTTGCGACAATGGAGAGCTAAATTCCTCCACCAGTTGGTTTCGTTTGCTAACGATCATACAGAAAAATTACAAGGATTCGATTGGATTGGTGGCGTTGGGAATCACAAGGATGCGTTTCTACCTTTATATGGAAATCTTCTTGGGTTTTATACCATTTCAAAATGCATTTTGCATGGAAGGATTGAAGATGGCGTGTGTTTACTTTCTGATGTTGTTGAATTAGAGAAATCCATAAGACCATTTCTGAGGAACCCTTTAGTTTGTAATTTGTACTCCCTCCGTTTTTTAATTTTCTGCTGGTTTGACTTTTCACGGTCTTCAATGCGTGCTTTGAGATTGGAAATGCAGCCTGCCATAACAATTCATTATATGAAGTACTTGGAAGGTCAATCTCTCAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18480.p1 GENE.R_Transcript_18480~~R_Transcript_18480.p1 ORF type:complete len:2275 (+),score=374.74,DUF2428|PF10350.5|3e-78,DUF2428|PF10350.5|5e+03 R_Transcript_18480:199-6825(+)
MSAKWRALQHRHRYTYNAVIFPQPYLDSITHFPAHELCQKFYTVLKEFVALNSIYAQVNYVKNVATSFSNLLGAASGENSVSLAAKLYLELLFFENSLPLHRTLVSVLSKNQKFWDLIRGCFKALCEEYGALCGRKGKRFCVSRAALSMMSTPKLGYLVEVVEDCCVLVGLDIVTGLNSVVTETEEFARPSPLVMEQCQEALSCLYYLLQRFPLKFVDVDYSQNGLVLKDSDLLEMVVRVILCILKSVAFSRDCFVAAGVAFFAALQVLLSLEELGLLIWEGVFEQKVCSLVGSVDVAHMNAVKRVPYKGDLCFELRSFAPLSRLCLLRGILTAVPRTVLNFHFVVEREESSETCPDKNDGISPKSILYDGILPELCNYSENPIDSHFNFHALTVMQICLQQIKTSIMANLGDVNYDFKPISEDLGARILRIIWNNLEDPLSQTVKQVHLILDLFLDIKSTLHRGDDPVIINSLLQKIAGDLLHLGPRCKGRYIPLASLTKRLGAKNILVMSPNLLFETVQAYIDDDVCCAATSFLKCFLERLRDECWASDGVERGYDIYRGYCLPPLLYGLASGFSKLRSNLNTYALPSLLEVDVDSIFPMLSFISIGVEAKIELVYPELGCADMAFSVEQKVAVLVSLLKVSRSLALFEGDIDSSHIPVVPSKNCPRVEEDAYIHIKGIRVDIPVKWLALALTHVDESLRVDAAESLFLNPKTASLPSPLELNLMRMSVPLNMRCCSTAFQMKWASLFKKFLARGRTALERQFKQGTWLPSDCLNNVEASVSNRTDESSVSRAEELYQFMKWFSCFLFSSCYPSAPYERKIMAMELIMIMINVWSIVPPSQGNDGSFSTEDLYPYNEGLTRPDSTMLLVGSIIDSWDRLRESAFRILVSYPTPLPGISSEDMVHEVILWAKKLVCSPRVRESDAGALALRLIFRKYVMELGWMVHASASVIFHKSEPENSNGNCQISKSRFPMIEYINSLIDWLQAVVEEGEKDLLEACKNSFVHGVLLTLRYTFEELDWDSDVIKSSIFETRHALGKLLELIMRITSLALWVVSADAWYLPQDMDEIEEDGLLMEISNEMAMQASPLQHEEKDTKVKQDARPTEQIVMVGCWLAMKEVSLLLGTVIRKIPLPTSTSSVGNGAADAAGDTLTPTSDAVLDVNQLEVIGNHFLEVLLKMKHNGAIDKTRAGFTALCNRLLCSDDPRLCQLVDSWMEQLMERTVAKGQTVDDLLRRSAGIPAAFSAFFLSEPQGAPKKLLPQALRWLIDVASGSLLDQTEPNNVVGELLNNLTAVSDLTDACMQISKVSANLTSSKVRVEGVIPTVHAFNVLRAAFNDANLATDTSGFSAEAMIISIRSFSSPHWEIRNSACLAYTALVRRIVGFLNVHKRESARRAITSLEFFHRYPSLHSFVFDELKVATGLLLHGKSTSNLARIVHPSLCPVLILLSRLKPSPIASETGDHLDPFLFMPFIQRCSTQSNMRIRILASRALTSLISNEKLHTVLLEIASGLPSSGNQPEKASVTSSQSGECFRSSFNSIHGTLLQLIALLDANCRNLADFSSKDLILDTLIKALSKCSWLGVPALCPCPTLNTSFLRVLDHMLSIAGSRQASEKYDVICSLLSQLSSDCLAAESSSKSSFHDPTAAELYKQAAISYLHCIFLCEEPAEKILKMPYWSSADLPMTKPFVKDGCGDVEGKLVSYMSDASYEVRLATFKWLLRYIKAAVIEFDDNRATSEAGAIALWAKANLQPSLLRILALETHHKCVYYILRIVFSWNLLQFQKATDTICGDSIYIGEMDIGSVLQFWNKLVSIYEISRHRKTLEVLLGCFGLCVKCFANLLGSVLHSDLSNLKSPTSDEVSRCTLLYDHIRWFVFLVKEYTDASQQYSLRKAAAESVVASGLLEQAQVIGHSVINNGIPSADSESRFESKNFVNMFAYLILETWFTCIKLLEDEDVDIRKEIALDIQKCFPEQFRNRFHAGLVLSQVEKVIELSFEFLTSIFGHWDRYFDYLLKRVLDVAGYDVAHQGDLVRRVFDKEIDNHHEEKMLIGQLCCSHLETLEVSRSQQPEFRKFLRQWRAKFLHQLVSFANDHTEKLQGFDWIGGVGNHKDAFLPLYGNLLGFYTISKCILHGRIEDGVCLLSDVVELEKSIRPFLRNPLVCNLYSLRFLIFCWFDFSRSSMRALRLEMQPAITIHYMKYLEGQSLN*

Click here to download the sequence:
Link to NCBI Protein BLAST