Transcript Information: R_Transcript_185338.p1


Annotated TAIR IDAT4G32980.1
Annotated Gene Namehomeobox gene 1
Annotated Gene Symbol(s)ATH1
Annotation TypeOrtholog
Chromosome Positionchr4:15914865-15916873 | Reverse length=473
E-Value6.8E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1227656123289
Replicate 20.59040563560768
Replicate 30.92593139668103
Condition 2: 8 Hour
Replicate 11.2049283278082
Replicate 20.78597124222093
Replicate 30.86132422978989
Condition 3: 24 Hour
Replicate 11.0490386430937
Replicate 21.0465588577251
Replicate 30.88474025975156


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_185338.p1 GENE.R_Transcript_185338~~R_Transcript_185338.p1 ORF type:complete len:569 (+),score=80.33,POX|PF07526.7|1.1e+04,POX|PF07526.7|5.5e-23,Homeobox_KN|PF05920.7|3.7e+03,Homeobox_KN|PF05920.7|2.6e-14,Homeobox|PF00046.25|6.8e-06 R_Transcript_185338:246-1952(+)
ATGGAGAGTGAGCTACAAATACAACCAGATATTTCCAACAGTGTAACTGTGGTCCATGAAGAAATCCCCCATCAAGTGTTGTCAGAATCCATTCTTAGGTCAACTTGGTTCCAACTAAATGCCCAGAATGAGAGTACCATCACATTTCCTATGCTTTCATCTATGCAAGGAGAGCCCTTCAAAGATTTTCATGCTGATAACTCTGTCAGCTATGATGGTTTGCACAATAGAGAAAATTTGAATCTGCATGAGCTTCGCTTGCGCGGTACATCTCTTGCCTCTGGTTCGTTGGGTACCTTAGCCAGCAGAAATGGCCTCAATGATGATGTGAATAATCTGGTTGTTCCTATGCAACAAGAGATTCCGATGAGAGAAATGTACTCGAGTGGCTGTGCTTATGCCTCGAGTTCCTCAGTTCCAAACACTATAAACTGTGATTATGAAGGCTTGGGTGGTGATGCCAATGGTAAATGGTATGAGAACAGATTTCTGAGACAGGCAGAACTGTGCTGGAGAACATCGGCATCTGGATTGGCGCCATTACAATTCCCTGAGAATCACACTGCAGATCAGTGGATGTTGCCAAACTCCACAAATGTGTGCTCGGATCATCCGTATGGAATGCCCATTTCTCAAAATGAGCTGTCACTGAGTCTCGCAACTTGCAGGCCTTCTCTTCCCTGTTCTGCCAGCATTCAGGATCGCTGTTCTAATATGAGCAGTTCCAGCGTTATCCACAATTCTCAATCTCAAAGAAGGATAGGTTCAGAATGTAGTTCTCAAGGGAACAAGGAGCTCTCACTTGGTTTTGCTTCAACTAGTAGATCTCCCCAGTTTTCACCAATAATATCCGGTTCAAGATATCTTTGTGCACTTCAGCAAATTCTTTCAGAACTTGCAAACTATTCACTCCTAGGTATTGACCAGAGCAGCTTTTCCACTGGTTTAGGAAGCTCAAGCTCGAGCCATCTTTTCACTTCAAATCACTTCATAGATCAAAGGGTTTCATTTAAGCCCTTCAATGAGATCGGCAATGATGATGGATCATTATATCCTATGGAAAATTCATATCAAAGAAGGGAAATTGAGTCCAAAAGGTCACAGCTGTTGGCTCTACTGCAAGTGGTGGATGATTGCTATAATAAAATCTTAGATGAGATACACACCGTAATATCTGCATTCCATGCTGCAACTGAGCTGGACTCTCAGTTACATACTTGTTTTGCTCTTCGAACAGTCTCATTCTTCTACAAAAACCTGAGAGAGAGGATCAGCAATCATATCCTCGCAATGGGAGTAGATAGTGGAAGCACGAGAGACAATGTGAGATCTTTCGAGAAATCTTTCATTCAAAAACAGTGGGCACTCCAGCAATTAAAGAGAAAAGATCAACAATTGTGGAGACCACAAAGAGGCTTACCAGAAAGATCTGTTTCAGTTTTACGGGCATGGATGTTTGAGAACTTTCTTCACCCGTACCCTAAAGATTCAGAGAAACATTTGCTTGCTATTAAAAGCGGCCTAACAAGAAGTCAGGTTTCAAACTGGTTTATAAACGCCCGGGTGCGTCTCTGGAAACCTTTGGTTGAAGAAATGTGCATTGAGCTCAACCGGAAGAAAGGGCCCCGACAAAACGAAGAGCCAACCAACACCACCCATAGGAGCCAGTTATGCATCTACGACTGCAATCAGAGATTCGACAGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_185338.p1 GENE.R_Transcript_185338~~R_Transcript_185338.p1 ORF type:complete len:569 (+),score=80.33,POX|PF07526.7|1.1e+04,POX|PF07526.7|5.5e-23,Homeobox_KN|PF05920.7|3.7e+03,Homeobox_KN|PF05920.7|2.6e-14,Homeobox|PF00046.25|6.8e-06 R_Transcript_185338:246-1952(+)
MESELQIQPDISNSVTVVHEEIPHQVLSESILRSTWFQLNAQNESTITFPMLSSMQGEPFKDFHADNSVSYDGLHNRENLNLHELRLRGTSLASGSLGTLASRNGLNDDVNNLVVPMQQEIPMREMYSSGCAYASSSSVPNTINCDYEGLGGDANGKWYENRFLRQAELCWRTSASGLAPLQFPENHTADQWMLPNSTNVCSDHPYGMPISQNELSLSLATCRPSLPCSASIQDRCSNMSSSSVIHNSQSQRRIGSECSSQGNKELSLGFASTSRSPQFSPIISGSRYLCALQQILSELANYSLLGIDQSSFSTGLGSSSSSHLFTSNHFIDQRVSFKPFNEIGNDDGSLYPMENSYQRREIESKRSQLLALLQVVDDCYNKILDEIHTVISAFHAATELDSQLHTCFALRTVSFFYKNLRERISNHILAMGVDSGSTRDNVRSFEKSFIQKQWALQQLKRKDQQLWRPQRGLPERSVSVLRAWMFENFLHPYPKDSEKHLLAIKSGLTRSQVSNWFINARVRLWKPLVEEMCIELNRKKGPRQNEEPTNTTHRSQLCIYDCNQRFDS*

Click here to download the sequence:
Link to NCBI Protein BLAST