Transcript Information: R_Transcript_185408.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value7E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0860526805393
Replicate 21.2997709781518
Replicate 32.0725143539376
Condition 2: 8 Hour
Replicate 11.2825929258081
Replicate 21.7036862355189
Replicate 32.1609060262365
Condition 3: 24 Hour
Replicate 12.9517180721334
Replicate 21.6804006773773
Replicate 33.2310421204467


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_185408.p2 GENE.R_Transcript_185408~~R_Transcript_185408.p2 ORF type:complete len:210 (+),score=26.22,RVT_1|PF00078.23|5.7e-16 R_Transcript_185408:3204-3833(+)
ATGCTTGTGGCTCTAAACTTCCTTGTGGAGTTCATTACTTGCCTGATGACCTGCACTTACAGTGCTTCATATGCAATCTCCCTAAATGGTGAATATCATGGATTCTTCAAAGGAGCCAAAGGCTTTAGGCAGGGTGACCCTCTCTCCCCTCTTCTTTTTGTATTATGCATGGAATATTTGTCGAGAATCCTCCAAATGGTAGGTGAGTTAGAAGGCTTCTCTTATCACCCTTTGTGTAAAAAGATGGCCCTCAATCATATAGGTTTTGCAGATGACTTGATTCTCTTCTGTGCTGGGGATGCCAAGTCTGTTAATTTGATGTTAAGGGGTTTTAAAAGCTTCTCAGAAACCTCTGGGCTTGAAATGATTGAGAATAAGTCTGCTATGTTTATGGGGGGTGTGGAGACACAAGCTAAAGACAATCTTAGACTAATGACTGGCTTGCCTATGTCAAATCTGCCTTTCTCCTACTTGGCTGTACTGATTACCTCAAAAAGACTTACTGTTGTTGACTGTGACGACCTTGTTGAGAAGCTAACAACCAGGATAAGGCAATGGAGATCCAAACATCTATCTTATGCAGGCATATTAGTATTGGTGAATTCAGTGCTACTTAGTCTACATAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_185408.p2 GENE.R_Transcript_185408~~R_Transcript_185408.p2 ORF type:complete len:210 (+),score=26.22,RVT_1|PF00078.23|5.7e-16 R_Transcript_185408:3204-3833(+)
MLVALNFLVEFITCLMTCTYSASYAISLNGEYHGFFKGAKGFRQGDPLSPLLFVLCMEYLSRILQMVGELEGFSYHPLCKKMALNHIGFADDLILFCAGDAKSVNLMLRGFKSFSETSGLEMIENKSAMFMGGVETQAKDNLRLMTGLPMSNLPFSYLAVLITSKRLTVVDCDDLVEKLTTRIRQWRSKHLSYAGILVLVNSVLLSLHK*

Click here to download the sequence:
Link to NCBI Protein BLAST