Transcript Information: R_Transcript_185408.p4


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3861196259826
Replicate 28.6050411542205
Replicate 37.5104057692303
Condition 2: 8 Hour
Replicate 15.6197067092038
Replicate 26.7815789190481
Replicate 36.1001314379989
Condition 3: 24 Hour
Replicate 18.0916861540269
Replicate 24.3387394538841
Replicate 35.3822224639911


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_185408.p4 GENE.R_Transcript_185408~~R_Transcript_185408.p4 ORF type:complete len:122 (+),score=10.22,zf-RVT|PF13966.2|2.7e-06,zf-RVT|PF13966.2|3.7e+02 R_Transcript_185408:4336-4701(+)
ATGCTCATGTTAGGCAAGGCCAGGACAAGGGATACCTTACAGAAGGTGGGAATATGTATGGACACTTCTTGTCCTTTCTATGACACTGATGCAGAGACTTTATCACACCTGTATTTCAAGTGCCCCTTTAGTGCTATAATGCTGCAGTCTTTCTGCTCATGGTGTGGCATCTCTCGGCTAGACTGGACTATTCAGCCCTTGTCAAAATGGATCCAAAGAAGAGTCAAGTATTCCAAGATAGCTAAGAAGGTGATATATGCTAGACTGGTAGCACTCATGTATTACATATGGACAGCAAGGAACTCTGCTATCTGGGAGAGAAAAGTACCAGTACCTGGCCAAACTTTTCACAGGCTACCGCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_185408.p4 GENE.R_Transcript_185408~~R_Transcript_185408.p4 ORF type:complete len:122 (+),score=10.22,zf-RVT|PF13966.2|2.7e-06,zf-RVT|PF13966.2|3.7e+02 R_Transcript_185408:4336-4701(+)
MLMLGKARTRDTLQKVGICMDTSCPFYDTDAETLSHLYFKCPFSAIMLQSFCSWCGISRLDWTIQPLSKWIQRRVKYSKIAKKVIYARLVALMYYIWTARNSAIWERKVPVPGQTFHRLPQ*

Click here to download the sequence:
Link to NCBI Protein BLAST