Transcript Information: R_Transcript_1855.p1


Annotated TAIR IDAT1G05385.1
Annotated Gene Namephotosystem II 11 kDa protein-related
Annotated Gene Symbol(s)LPA19, Psb27-H1
Annotation TypeOrtholog
Chromosome Positionchr1:1582747-1583648 | Reverse length=199
E-Value1.2E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.029064796473
Replicate 229.801200590875
Replicate 334.096203887361
Condition 2: 8 Hour
Replicate 120.08517954198
Replicate 219.784743380219
Replicate 319.071738347688
Condition 3: 24 Hour
Replicate 125.920104934505
Replicate 226.52729295134
Replicate 325.417979636397


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_1855.p1 GENE.R_Transcript_1855~~R_Transcript_1855.p1 ORF type:3prime_partial len:217 (+),score=42.38,PSII_Pbs27|PF13326.2|3.7e-48 R_Transcript_1855:269-916(+)
ATGCCTTTCACTCAAACTTTATACGAGAAGATGGCTCTTCACATTCCAGAGGGACCAAACCTGGTCCCTGCAAATCGGCACCAGTTGTTGGAAAAACCCATCAAAGATTGCTATAGGCAGTCCCGACATCACCTTAAACTAATTCCTGGAGAAAGTCAGTATAACCGGAGACAATTATGTACTGGTACTTCGTTGGTAGCCATTCTGAGCCTAAACCAGGCGATAACGTTGCTAACAGTTCTGGCTGAGGATAAAGCAGATGATAAACAAGAGGATGATAGCATAATTGGCACAATTAAGTCATTGTTTGACCCCAATGAGAAAACAAAGTCAGGGAAAGTGTTGCCAAAAGCCTACTTGAAGTCGGCAAGGGAGGTAGTGAAGACAATTCGAGAGTCGTTGAAGGAAGATCCAAAGGATATGGCTAAATTTAGGCGTACTGCAGATGCTGCAAAAGAGTCTATTCGCGACTATTTGAGTAACTGGAAGGGCCAGCAAGCTGTCTCAAAAGAAGAATCTTATATGGAGCTGGAGAAAGCATTTAGATCCCTTGCGAGCTTCTATGCAAAGGCCGGTCCATCTGCTTCACTCACTGATGAGGTCAAGTCTGAAATCTTGCGCGGTTTAGATGCTGCTGAAGAATTTTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_1855.p1 GENE.R_Transcript_1855~~R_Transcript_1855.p1 ORF type:3prime_partial len:217 (+),score=42.38,PSII_Pbs27|PF13326.2|3.7e-48 R_Transcript_1855:269-916(+)
MPFTQTLYEKMALHIPEGPNLVPANRHQLLEKPIKDCYRQSRHHLKLIPGESQYNRRQLCTGTSLVAILSLNQAITLLTVLAEDKADDKQEDDSIIGTIKSLFDPNEKTKSGKVLPKAYLKSAREVVKTIRESLKEDPKDMAKFRRTADAAKESIRDYLSNWKGQQAVSKEESYMELEKAFRSLASFYAKAGPSASLTDEVKSEILRGLDAAEEFL

Click here to download the sequence:
Link to NCBI Protein BLAST