Transcript Information: R_Transcript_185528.p2


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value9E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.1354364663035
Replicate 22.7885711490396
Replicate 32.6843833120491
Condition 2: 8 Hour
Replicate 12.6781414786049
Replicate 22.7951102301482
Replicate 31.7017134956613
Condition 3: 24 Hour
Replicate 12.5110101655301
Replicate 22.5846006512395
Replicate 32.7359630858622


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_185528.p2 GENE.R_Transcript_185528~~R_Transcript_185528.p2 ORF type:complete len:128 (+),score=6.99,zf-RVT|PF13966.2|1.6e-06 R_Transcript_185528:4106-4489(+)
ATGTTAGCCTTATGGGATGAGTTCATCAGATTAACAGGAGGGAAGATCCAAGCTTCTGAAATAATCCGAGAGTGGTTAGTGACGCATGATTCTTTTGCCAGGGCTACTTATCATATTTTCAGAGGAGGAAACAGAAAGGTGTTCTGGGTGAAAACTATATGGGACTCTGCAAATATTCCTAAACACTCAGTTATCACTATCTTAGCAATTCACAATGGTTTACCTACACTAGACAATATCAGCAAGCGAGGTATGCATTTAGTTAATAGATGCATAGGCCGCAGGAGAACATTCAGCACTTGTTTTTCAATTGTACAGAGGCATAAAAAATCTGGCAAAGAGTTCTTACCTAGCTGGGTATTACCAGAAAAGCTAAGAGTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_185528.p2 GENE.R_Transcript_185528~~R_Transcript_185528.p2 ORF type:complete len:128 (+),score=6.99,zf-RVT|PF13966.2|1.6e-06 R_Transcript_185528:4106-4489(+)
MLALWDEFIRLTGGKIQASEIIREWLVTHDSFARATYHIFRGGNRKVFWVKTIWDSANIPKHSVITILAIHNGLPTLDNISKRGMHLVNRCIGRRRTFSTCFSIVQRHKKSGKEFLPSWVLPEKLRV*

Click here to download the sequence:
Link to NCBI Protein BLAST