Transcript Information: R_Transcript_185551.p1


Annotated TAIR IDAT3G48550.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17994048-17994595 | Forward length=158
E-Value1.2E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23860079679371
Replicate 21.0978457734012
Replicate 31.946324109477
Condition 2: 8 Hour
Replicate 11.4403449968968
Replicate 20.73074777258776
Replicate 30.4745519116441
Condition 3: 24 Hour
Replicate 10.90030616579232
Replicate 20.14415201889266
Replicate 30.28611378675683


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_185551.p1 GENE.R_Transcript_185551~~R_Transcript_185551.p1 ORF type:complete len:153 (+),score=31.03 R_Transcript_185551:119-577(+)
ATGGAAAAAGATTTAGATCACCAAAAAGAGCTTCAACTCCTACCTCCTTCTTCTTCCACTTCCTCATCACGTGCCCTCACGTGGCTCTCCCACCACCACCACCACCACCATCATCAATGTCACCCGCCACCTCCACAGCCTTCATTGGACCTGAAGCTCTCCATCAGCCTACAGCCAGCGGCGGAGGCGGCGGAATTGGGGTGTGTGGAAGCACTGAAATGGCAGGCGGCCGAGCATATACGCTTGGCCGCCATCGAGAAGGCGTACGCGGAGCAGGTGAGGGAGCTGACTAGGAGAGAGATTGAGCTTGCTCAGTCGGAGTTCGCCCGGGCCCGTGCAATGTGGGATAAGGCCCGAGAAGAGGTGGCCCGGGCTGAACGCCTTCGTGACACTGCCTCCTCTTGCATGGGGGAACTCACTTGCCACTCTTGTAGGCAAAGGTTCCGTCCACCTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_185551.p1 GENE.R_Transcript_185551~~R_Transcript_185551.p1 ORF type:complete len:153 (+),score=31.03 R_Transcript_185551:119-577(+)
MEKDLDHQKELQLLPPSSSTSSSRALTWLSHHHHHHHHQCHPPPPQPSLDLKLSISLQPAAEAAELGCVEALKWQAAEHIRLAAIEKAYAEQVRELTRREIELAQSEFARARAMWDKAREEVARAERLRDTASSCMGELTCHSCRQRFRPPS*

Click here to download the sequence:
Link to NCBI Protein BLAST