Transcript Information: R_Transcript_185579.p1


Annotated TAIR IDAT5G66520.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:26551879-26553741 | Forward length=620
E-Value1E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7783215636031
Replicate 21.0034996522495
Replicate 31.0526993380585
Condition 2: 8 Hour
Replicate 10.99023718536653
Replicate 21.0276140552015
Replicate 31.5015119079364
Condition 3: 24 Hour
Replicate 11.477064803253
Replicate 20.97302612752547
Replicate 31.9715028118713


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_185579.p1 GENE.R_Transcript_185579~~R_Transcript_185579.p1 ORF type:complete len:544 (+),score=112.95,PPR_2|PF13041.2|0.00051,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|9.7e-09,PPR_2|PF13041.2|0.001,PPR_2|PF13041.2|1.9e-10,PPR_2|PF13041.2|0.42,PPR_2|PF13041.2|4.8e+02,PPR_2|PF13041.2|5.6e+03,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|21,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|0.077,PPR|PF01535.16|2.2e-08,PPR|PF01535.16|2.7e-06,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|5.8e-05,PPR|PF01535.16|7.5e-06,PPR|PF01535.16|0.059,PPR|PF01535.16|5.6,PPR|PF01535.16|3.4e+03,PPR|PF01535.16|7.1e+02,PPR|PF01535.16|7e+03,PPR_3|PF13812.2|74,PPR_3|PF13812.2|67,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|0.027,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|0.08,PPR_3|PF13812.2|0.0042,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|5,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|3.4e+03,PPR_1|PF12854.3|37,PPR_1|PF12854.3|5.1e+03,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.00023,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|3.8e+03,PPR_1|PF12854.3|0.00039,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|0.16,PPR_1|PF12854.3|6.8,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|4.2e+03 R_Transcript_185579:75-1706(+)
ATGGCCGAACTCACAAGTTCATTGCTAAAGAACTCCATTTCCCGCTTACTGGGCCAATGCAAGAGCATGAAAGAGCTTAAAAAAATCCATGTCCACATCATAAAATCTTCTTGTCTCTCTGAACCTGACCGTTATTTCCTCACCACTCGCCTTGTCTTCTTTTGTGCCCTTTCACAACCAGGTTCTCTTTCTTATGCTACCAAACTTTTCCATAACTTGGAAAGATTGAATCTTTATGTTTATAATGCCCTAATTAGAGCTTATGCTTGCAGACCAATTTCTGGGAAAGCCCCAGATTATTGCCCCTCTTTTTCTTTATATACTCAAATGTTAAGAAATGGTATTTGCCCTGATAGGCTTACTTTCCCATTTATCTTAAAAGAATGTACTAAAAGACTTGATTTTTATAAGGGTATGGCTGTTTATTCCCATGTTTTGAAATTTGGGTTTCATGATGATGTTTATATTCAAAATTGTATGATCTTTTTGTTGTCTGAATGTGGGTTACTGGGTTGTGCGCAGAAGTTGTTTGATGAAATGCCTCAACGAGATGTTGTTTCTTGGAATTCAATGATTGCTGGGTATTTGAGAAGCGGGGACCTTGATTTAGCATTGAGTATGTTCATGAGGATGGAAAAGAGAAGTATATATACTTGGAATTCTATGATCACAGGCTTTGTTCAAGCTGGTCAGCCAAAGATGGGTTTAAAGCTGTTCCAAGAACTGCAAGTGGTTGGGGATGATGGAGTTAGACCTGATAAAATTACTATTGCCAGTGTTCTTTCAGCTTGTGCATCTTTGGGCGCCATTGATCATGGGAATTGGGTTTACGGTTACCTGAAGAGGAATGGATTAGTGTTTGATATGGTGATTGCTACAGCATTGATTGATATGTATGGTAAATGTGGACATGTGGATAGAGCAGTTGAAATCTTCAGAGCAATGCCCAAGAAGGATGTATTAGCATGGACAGCCATGATCTCAGTCTATGCTCTTCATGGTTATGGGAAGGAAGCTTTGGCTCTTTTGAAAGAGATGGATGCACAAGGAGTGAAGCCAAACCATGTCACCTTTGTCGGGCTTTTGTCAGCATGTGCTCATTCTGGCTTGGTAGAGGAAGGTCGATGGTGCTTTGATGTGATGACTAGTGCTTACTCAATTGAGCCATGTGTTTATCACTATGCATGTATGGTCGATATACTTAGTCGAGCAGCTTTATTTGATGAGGCAGAACAACTGATCAGTGGGATGCTGGTCGAGCCTGATGTGTATGTTTGGGGTGCATTGCTTGGTGGCTGTCAAATGCACAAAAATGTTCAGCTAGGGGAGAAGGTTGCTTTGAGATTAATTGATTTAGATCCCCAAAACCATGCTTTCTACATTAACCTTTGTGACATTTATGCCAAAGCTTGTAGATTTGGTGATGTAAAGAGAGTAAGAGCCATCATGCAAGAGAAAGGAATTAAGAAAGATACACCAGGCTCGAGCATGATTGAAGTTGATGGCATTGTTCTGGAATTCTCTGTTAGAGGATCAACTGAACTTCTGATGGAGGAACTTGTTTGGTTATTGTGTAGACTACATAATGAGATGAAGAAAGGTTCCAATATGAATGATATTGGTGATGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_185579.p1 GENE.R_Transcript_185579~~R_Transcript_185579.p1 ORF type:complete len:544 (+),score=112.95,PPR_2|PF13041.2|0.00051,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|9.7e-09,PPR_2|PF13041.2|0.001,PPR_2|PF13041.2|1.9e-10,PPR_2|PF13041.2|0.42,PPR_2|PF13041.2|4.8e+02,PPR_2|PF13041.2|5.6e+03,PPR|PF01535.16|1.6e+04,PPR|PF01535.16|21,PPR|PF01535.16|1.6e+03,PPR|PF01535.16|0.077,PPR|PF01535.16|2.2e-08,PPR|PF01535.16|2.7e-06,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|5.8e-05,PPR|PF01535.16|7.5e-06,PPR|PF01535.16|0.059,PPR|PF01535.16|5.6,PPR|PF01535.16|3.4e+03,PPR|PF01535.16|7.1e+02,PPR|PF01535.16|7e+03,PPR_3|PF13812.2|74,PPR_3|PF13812.2|67,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|0.027,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|0.08,PPR_3|PF13812.2|0.0042,PPR_3|PF13812.2|3.7,PPR_3|PF13812.2|5,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|3.4e+03,PPR_1|PF12854.3|37,PPR_1|PF12854.3|5.1e+03,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.00023,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|3.8e+03,PPR_1|PF12854.3|0.00039,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|0.16,PPR_1|PF12854.3|6.8,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|4.2e+03 R_Transcript_185579:75-1706(+)
MAELTSSLLKNSISRLLGQCKSMKELKKIHVHIIKSSCLSEPDRYFLTTRLVFFCALSQPGSLSYATKLFHNLERLNLYVYNALIRAYACRPISGKAPDYCPSFSLYTQMLRNGICPDRLTFPFILKECTKRLDFYKGMAVYSHVLKFGFHDDVYIQNCMIFLLSECGLLGCAQKLFDEMPQRDVVSWNSMIAGYLRSGDLDLALSMFMRMEKRSIYTWNSMITGFVQAGQPKMGLKLFQELQVVGDDGVRPDKITIASVLSACASLGAIDHGNWVYGYLKRNGLVFDMVIATALIDMYGKCGHVDRAVEIFRAMPKKDVLAWTAMISVYALHGYGKEALALLKEMDAQGVKPNHVTFVGLLSACAHSGLVEEGRWCFDVMTSAYSIEPCVYHYACMVDILSRAALFDEAEQLISGMLVEPDVYVWGALLGGCQMHKNVQLGEKVALRLIDLDPQNHAFYINLCDIYAKACRFGDVKRVRAIMQEKGIKKDTPGSSMIEVDGIVLEFSVRGSTELLMEELVWLLCRLHNEMKKGSNMNDIGDE*

Click here to download the sequence:
Link to NCBI Protein BLAST