Transcript Information: R_Transcript_18558.p1


Annotated TAIR IDAT5G56040.2
Annotated Gene NameLeucine-rich receptor-like protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22695050-22698410 | Forward length=1090
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.928463871079
Replicate 29.2010454268755
Replicate 314.762119784187
Condition 2: 8 Hour
Replicate 110.20788503134
Replicate 212.601599188722
Replicate 318.861540280207
Condition 3: 24 Hour
Replicate 121.774204721742
Replicate 215.389669536981
Replicate 317.626898174515


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18558.p1 GENE.R_Transcript_18558~~R_Transcript_18558.p1 ORF type:complete len:1125 (+),score=219.44,LRR_8|PF13855.2|0.003,LRR_8|PF13855.2|0.033,LRR_8|PF13855.2|0.072,LRR_8|PF13855.2|2e-08,LRR_8|PF13855.2|27,LRR_8|PF13855.2|0.00027,LRR_8|PF13855.2|0.0028,LRR_8|PF13855.2|7.7e-05,LRR_8|PF13855.2|7e-06,LRR_8|PF13855.2|4.3e-05,Pkinase|PF00069.21|1.1e-37,LRR_4|PF12799.3|13,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|0.034,LRR_4|PF12799.3|0.25,LRR_4|PF12799.3|9.5,LRR_4|PF12799.3|0.38,LRR_4|PF12799.3|1.4,LRR_4|PF12799.3|0.0004,LRR_4|PF12799.3|0.31,LRR_4|PF12799.3|8.8,LRR_4|PF12799.3|0.00062,LRR_4|PF12799.3|0.0014,LRR_4|PF12799.3|8.3e-05,LRR_4|PF12799.3|0.6,LRR_4|PF12799.3|0.27,LRR_4|PF12799.3|0.0013,Pkinase_Tyr|PF07714.13|4e-34,LRRNT_2|PF08263.8|7e-12,LRR_1|PF00560.29|2.7e+03,LRR_1|PF00560.29|1.7e+02,LRR_1|PF00560.29|54,LRR_1|PF00560.29|3.8e+03,LRR_1|PF00560.29|9.4e+02,LRR_1|PF00560.29|1.2e+04,LRR_1|PF00560.29|7.8,LRR_1|PF00560.29|8.9e+02,LRR_1|PF00560.29|22,LRR_1|PF00560.29|2e+03,LRR_1|PF00560.29|15,LRR_1|PF00560.29|1.8e+03,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|0.21,LRR_1|PF00560.29|3e+02,LRR_1|PF00560.29|1.1,LRR_1|PF00560.29|76,LRR_1|PF00560.29|36,LRR_1|PF00560.29|1.7e+02,LRR_1|PF00560.29|2.3e+02,LRR_1|PF00560.29|2e+02 R_Transcript_18558:162-3536(+)
ATGGGGTTTCCCCCTCTTTTACAATCCCAAAGTCCCTTCCCTTCCTCTGCTTCTCTGTTCCTCTCAGAAGCAATGCCTGCAATTCTAAGTAACCCCTTCTTCTTACTTTATCCTAGACATGTTTTTTCCTACACATTACCAATTCTTTCTTTCAACTTATTTCTATTCTTTCATTTTTGTCTCTCCATTGATGAACAAGGCCAAGCACTTCTATCATGGAAGAACTCCTTAGACCTTACAGATGATACATTATTAGCCTCATGGAAATCTTCGGACCCGAACCCATGTAGCTGGTTCGGGGTTCGTTGTAACAGCAAGGGAGAAGTTGAAGCATTGAGCATAAAATCAGTGAATTTGCAGGGTTCATTGCCTGCAAATTTACAGCCTCTTAAGTCACTGAATTCTATGGTTCTATCATCAACCAACCTTACAGGTAAAATCCCAAAAGAGTTTGGAGATTATCAAGCCTTGAAGCTGATTGATATCAGTGACAATGATATATCAGGAGAAATACCAGTTGAAATCTGCAGGCTTCAGAATTTAGAAACACTCTCACTTCAAACCAACAGTCTTGAAGGTTCAGTCCCTTCTGACATTGGTAATCTTAGCAGCCTTGTTTCTTTTACTATCTATGATAATCAACTCAATGGAGAAATCCCAAAGAGTATCGGATCGTTAAAGAAGCTTGAAGTGTTTCGAGCTGGTGGGAATCAGAATCTCAAGGGAGAGGTCCCATCTGAGATTGGAAACTGCACTAACCTGATCACTCTTGGCCTTGCTGAGACCGGCATCTCAGGAAGAATCCCATCATCTATAGGAAACCTGAAGAAACTTCAGACACTTGCAATATATACTGCTTTGCTGTCTGGTTCAATCCCAGAAGAGATTGGTGACTGCAGTGAACTGCAGAACCTGTATTTGTATCAAAATTCGATATCTGGGTCAATCCCAAAGAGGATTGGTGAGCTGAAAAAGCTTCAGAGTGTGCTTCTATGGCAGAACAGCATCGTGGGTACGATCCCAGATGAGCTCGGAAGCTGCACAGAGCTAACTGTCATAGACCTGTCTGAAAACTTACTGACAGGAAGCATACCGAGAAGTTTTGGGAATATCACAGGGCTTCAAGAGCTTCAGCTGAGTGTGAACCAGATATCAGGAACTATTCCACCTGAGCTCACCAGCTGTACTGCGCTAACTCACCTGGAAGTCGACAACAATGAGCTCTCAGGTGAGATACCTGCAGGTATCGGCAATTTGAAGAGCTTGACTCTGTTCTTTGCCTGGAAGAATCAGCTCACAGGGAAGTTACCAGGAAGTCTAGCTCAGTGTGAGGAGCTTCAGGCGCTTGATCTTTCTTACAACGGCTTAATTGGTGCAATACCAAGAGAGATTTTCGGGCTAAGAAATCTCACTAAGTTTCTGTTACTCTCTAATGACTTGTCAGGGTTCATACCCCCTGATATAGGCAACTGCACAAATTTGTACAGGTTCCGGGTGAACGGAAATAAGCTTGGAGGCACTATTCCATCCGAAATAGGGAGTTTGAAGAGCTTGAATTTCCTTGATTTGAGCAACAATCGATTCACCGGAGGGATCCCTCCTTCATTGTCAAGCTGTGAGAGCTTGGAATACTTTGATGTCCATTCAAATGGGCTCACAGGTTCCTTGCCTGATAAACTCCCTGAAAGTCTACAGTTTGTGGACTTGTCAAACAACAGGCTCACAGGTACACTGCCACCTTCTATAGGCTCTTTGAATGAGTTGACCAAACTTATTCTTAGGAACAACCAAATTTCTGGGAGAATTCCTGCTGAGATCCTATCTTGCAATAGATTGCAACAATTGGACTTGGGAAACAATGGTTTTTCAGGAGAGATACCGAAGGAACTTGGTCAACTCCCAGCAATGGAGATCTCTCTAAATCTTAGCAGCAACCAATTTTCAGGTCAGATCCCAACCCAATTCTCGAGCCTAACTAAGCTTGGAGTTCTTGACATTTCCCATAACAAGCTCACTGGCAACTTAAACATCCTTGCCAACCTCCAAAATCTCGTTTCCTTGAATGTTTCGTTCAATGATTTCTCCGGCCAACTGCCTGACACGCCTTTCTTTCACAAACTCCCTCTTAGCAACCTTGCGGGTAACAAGGCATCATCTCTGCCCAATGGAAGTGCAAACTCTTCTGAGCAACATGCTGCAAAAGCTCGATACACTATGAAGCTGGCAATGTCTATCCTAGTCAGCATCAGTGTCGTTCTGATACTCTTAGCAATCTACATGTTGGTCCGTGCTAGGATGGCTGATCGACACATGATTGAAGACGACACTTGGGAATTGACTCTCTACCAGAAGATGGAGTTCTCAATCGATGATGTCATCAGAAACTTGACATCAGCTAATGTAATAGGAACTGGCAGTTCAGGGGTTGTATACAGGGTAACTATGCCTAGTGGAGAAACACTTGCAGTAAAGAAGATGTGGTCTACAGAAGAAACTGGAGCCTTCAGGTCAGAAATTGAGACCTTAGGTTCTATTCGTCATAAGAACATAGTTCGTCTTTTGGGGTGGGGATCAAACAGGAACTTGAAGCTCCTGTTCTATGATTACCTCCCGAATGGGAGCTTAAGCTCGCTCCTTCATGGTGCTGTCAAGGGTGGAGGAGCTGAATGGGAAGCTAGATATGATGTTATGCTTGGGGTTGCTCATGCACTTGCTTACTTGCATCACGATTGTGTGCCTGCCATCTTACATGGGGACGTCAAAGCCATGAATGTCTTATTGGGTCCTAGATTTGAGCCTTACCTTGCTGACTTTGGGCTAGCCAGGCTTGTCAATAGCAGTTCTAATGACGATTGCTCTAAATTGAACCAAAGACCTCACCTAGCTGGTTCCTATGGATATATGGCCCCTGAACTTGGCTCCATGCAGCGAGTGACAGAAAAGAGCGATGTGTACAGTTTCGGTGTAGTTCTTCTAGAGGTATTAACAGGAAAGCATCCTCTAGACCCAGCATTGCCAGGAGGAGGCCATTTAGTCCAATGGGCTCGAGATCATCTGCAATGCAAAGGTGATCCAGCTGACATCCTTGATGCAAAACTCCGTGGAAGGGCTGACCCTCAAATGCACGAAATGTTGCAGACCTTAGCCGTCGCATTCCTGTGTGTCAGTACTCGATCATCAGACCGTCCTACCATGAAAGATGTTGTAGCTATGCTCAAGGAGATTCGACATGTTGAGACTGTTAGAGGGGAGCCTGATTTGACAAAAAGCTCACTTCAAGTTCAAGCTCTGCCTACACCTTCGCCTAAGAGGAATGTGGTTTGCCACGGGTCTTCTAACTGCTCGTTTGCTTTCTCTGATGATTCAATGTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18558.p1 GENE.R_Transcript_18558~~R_Transcript_18558.p1 ORF type:complete len:1125 (+),score=219.44,LRR_8|PF13855.2|0.003,LRR_8|PF13855.2|0.033,LRR_8|PF13855.2|0.072,LRR_8|PF13855.2|2e-08,LRR_8|PF13855.2|27,LRR_8|PF13855.2|0.00027,LRR_8|PF13855.2|0.0028,LRR_8|PF13855.2|7.7e-05,LRR_8|PF13855.2|7e-06,LRR_8|PF13855.2|4.3e-05,Pkinase|PF00069.21|1.1e-37,LRR_4|PF12799.3|13,LRR_4|PF12799.3|0.022,LRR_4|PF12799.3|0.034,LRR_4|PF12799.3|0.25,LRR_4|PF12799.3|9.5,LRR_4|PF12799.3|0.38,LRR_4|PF12799.3|1.4,LRR_4|PF12799.3|0.0004,LRR_4|PF12799.3|0.31,LRR_4|PF12799.3|8.8,LRR_4|PF12799.3|0.00062,LRR_4|PF12799.3|0.0014,LRR_4|PF12799.3|8.3e-05,LRR_4|PF12799.3|0.6,LRR_4|PF12799.3|0.27,LRR_4|PF12799.3|0.0013,Pkinase_Tyr|PF07714.13|4e-34,LRRNT_2|PF08263.8|7e-12,LRR_1|PF00560.29|2.7e+03,LRR_1|PF00560.29|1.7e+02,LRR_1|PF00560.29|54,LRR_1|PF00560.29|3.8e+03,LRR_1|PF00560.29|9.4e+02,LRR_1|PF00560.29|1.2e+04,LRR_1|PF00560.29|7.8,LRR_1|PF00560.29|8.9e+02,LRR_1|PF00560.29|22,LRR_1|PF00560.29|2e+03,LRR_1|PF00560.29|15,LRR_1|PF00560.29|1.8e+03,LRR_1|PF00560.29|1.2e+03,LRR_1|PF00560.29|0.21,LRR_1|PF00560.29|3e+02,LRR_1|PF00560.29|1.1,LRR_1|PF00560.29|76,LRR_1|PF00560.29|36,LRR_1|PF00560.29|1.7e+02,LRR_1|PF00560.29|2.3e+02,LRR_1|PF00560.29|2e+02 R_Transcript_18558:162-3536(+)
MGFPPLLQSQSPFPSSASLFLSEAMPAILSNPFFLLYPRHVFSYTLPILSFNLFLFFHFCLSIDEQGQALLSWKNSLDLTDDTLLASWKSSDPNPCSWFGVRCNSKGEVEALSIKSVNLQGSLPANLQPLKSLNSMVLSSTNLTGKIPKEFGDYQALKLIDISDNDISGEIPVEICRLQNLETLSLQTNSLEGSVPSDIGNLSSLVSFTIYDNQLNGEIPKSIGSLKKLEVFRAGGNQNLKGEVPSEIGNCTNLITLGLAETGISGRIPSSIGNLKKLQTLAIYTALLSGSIPEEIGDCSELQNLYLYQNSISGSIPKRIGELKKLQSVLLWQNSIVGTIPDELGSCTELTVIDLSENLLTGSIPRSFGNITGLQELQLSVNQISGTIPPELTSCTALTHLEVDNNELSGEIPAGIGNLKSLTLFFAWKNQLTGKLPGSLAQCEELQALDLSYNGLIGAIPREIFGLRNLTKFLLLSNDLSGFIPPDIGNCTNLYRFRVNGNKLGGTIPSEIGSLKSLNFLDLSNNRFTGGIPPSLSSCESLEYFDVHSNGLTGSLPDKLPESLQFVDLSNNRLTGTLPPSIGSLNELTKLILRNNQISGRIPAEILSCNRLQQLDLGNNGFSGEIPKELGQLPAMEISLNLSSNQFSGQIPTQFSSLTKLGVLDISHNKLTGNLNILANLQNLVSLNVSFNDFSGQLPDTPFFHKLPLSNLAGNKASSLPNGSANSSEQHAAKARYTMKLAMSILVSISVVLILLAIYMLVRARMADRHMIEDDTWELTLYQKMEFSIDDVIRNLTSANVIGTGSSGVVYRVTMPSGETLAVKKMWSTEETGAFRSEIETLGSIRHKNIVRLLGWGSNRNLKLLFYDYLPNGSLSSLLHGAVKGGGAEWEARYDVMLGVAHALAYLHHDCVPAILHGDVKAMNVLLGPRFEPYLADFGLARLVNSSSNDDCSKLNQRPHLAGSYGYMAPELGSMQRVTEKSDVYSFGVVLLEVLTGKHPLDPALPGGGHLVQWARDHLQCKGDPADILDAKLRGRADPQMHEMLQTLAVAFLCVSTRSSDRPTMKDVVAMLKEIRHVETVRGEPDLTKSSLQVQALPTPSPKRNVVCHGSSNCSFAFSDDSMC*

Click here to download the sequence:
Link to NCBI Protein BLAST