Transcript Information: R_Transcript_1856.p2


Annotated TAIR IDAT1G05385.1
Annotated Gene Namephotosystem II 11 kDa protein-related
Annotated Gene Symbol(s)LPA19, Psb27-H1
Annotation TypeOrtholog
Chromosome Positionchr1:1582747-1583648 | Reverse length=199
E-Value2.7E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.32942404086
Replicate 213.273523251683
Replicate 38.9520583709101
Condition 2: 8 Hour
Replicate 19.5691886000728
Replicate 27.9676705411121
Replicate 38.5542073038605
Condition 3: 24 Hour
Replicate 112.402493559794
Replicate 214.703505927052
Replicate 312.579140624654


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_1856.p2 GENE.R_Transcript_1856~~R_Transcript_1856.p2 ORF type:complete len:87 (+),score=20.24,PSII_Pbs27|PF13326.2|4e-27 R_Transcript_1856:2024-2284(+)
ATGGCTAAATTTAGGCGTACTGCAGATGCTGCAAAAGAGTCTATTCGCGACTATTTGAGTAACTGGAAGGGCCAGCAAGCTGTCTCAAAAGAAGAATCTTATATGGAGCTGGAGAAAGCATTTAGATCCCTTGCGAGCTTCTATGCAAAGGCCGGTCCATCTGCTTCACTCACTGATGAGGTCAAGTCTGAAATCTTGCGCGGTTTAGATGCTGCTGAAGAATTTTTGCAGCTTAACACTAAACAGACGTTACCTGTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_1856.p2 GENE.R_Transcript_1856~~R_Transcript_1856.p2 ORF type:complete len:87 (+),score=20.24,PSII_Pbs27|PF13326.2|4e-27 R_Transcript_1856:2024-2284(+)
MAKFRRTADAAKESIRDYLSNWKGQQAVSKEESYMELEKAFRSLASFYAKAGPSASLTDEVKSEILRGLDAAEEFLQLNTKQTLPV*

Click here to download the sequence:
Link to NCBI Protein BLAST