Transcript Information: R_Transcript_18576.p1


Annotated TAIR IDAT1G76490.1
Annotated Gene Namehydroxy methylglutaryl CoA reductase 1
Annotated Gene Symbol(s)HMG1, HMGR1, AtHMGR1
Annotation TypeOrtholog
Chromosome Positionchr1:28695801-28698206 | Forward length=642
E-Value7.5E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1141.13114140247
Replicate 2119.91701474875
Replicate 3137.6765775109
Condition 2: 8 Hour
Replicate 1110.06017646391
Replicate 2127.82586578286
Replicate 3132.11378451539
Condition 3: 24 Hour
Replicate 1122.59942416444
Replicate 2115.84695262628
Replicate 3110.56675563484


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18576.p1 GENE.R_Transcript_18576~~R_Transcript_18576.p1 ORF type:5prime_partial len:194 (+),score=51.67,HMG-CoA_red|PF00368.14|1.8e-72 R_Transcript_18576:1-582(+)
TGTTCAGACAAGAAGCCAGCAGCAGTGAACTGGATAGAAGGAAGAGGGAAATCTGTGGTATGTGAGGCAGTAATCAAGGAAGAAGTGGTCAAAAAGGTTTTAAAGACAGATGTAGCTGCTCTTGTGGAGCTAAACATGCTTAAGAATCTTACTGGTTCAGCTGTTGCTGGTGCACTTGGCGGCTTTAACGCGCATGCTGCCAATATTGTGTCTGCTATCTACATTGCCACTGGACAAGATCCGGCCCAAAATGTGGAGAGCTCTCACTGTATTACCATGATGGAAGCCATTAATGATGGCAAGGATCTACATATCTCTGTTAGCATGCCTTCTATTGAGGTTGGAACTGTAGGGGGTGGTACGCAACTAGCTTCTCAATCAGCATGCCTCAACCTGCTTGGAGTGAAGGGTGCAAACAAAGAGCAGGCTGGAAGAAACGCTAGGCTGCTTGCCACCATTGTTGCTGGTTCTGTTCTTGCCGGGGAGCTCTCTCTCATGTCTGCAATTGCTGCCGGCCAACTTGTACGAAGCCACATGAAATACAATCGATCAAGCAGAGACATTACCAAAGCCTCCTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18576.p1 GENE.R_Transcript_18576~~R_Transcript_18576.p1 ORF type:5prime_partial len:194 (+),score=51.67,HMG-CoA_red|PF00368.14|1.8e-72 R_Transcript_18576:1-582(+)
CSDKKPAAVNWIEGRGKSVVCEAVIKEEVVKKVLKTDVAALVELNMLKNLTGSAVAGALGGFNAHAANIVSAIYIATGQDPAQNVESSHCITMMEAINDGKDLHISVSMPSIEVGTVGGGTQLASQSACLNLLGVKGANKEQAGRNARLLATIVAGSVLAGELSLMSAIAAGQLVRSHMKYNRSSRDITKASS*

Click here to download the sequence:
Link to NCBI Protein BLAST