Transcript Information: R_Transcript_185980.p1


Annotated TAIR IDAT4G01995.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:873075-874619 | Forward length=258
E-Value7.7E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7515644390061
Replicate 23.3327460978251
Replicate 33.3451108870572
Condition 2: 8 Hour
Replicate 12.8761174699939
Replicate 22.6975032062383
Replicate 32.3049664279856
Condition 3: 24 Hour
Replicate 14.3000337347128
Replicate 22.6606344058474
Replicate 35.0029039284337


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_185980.p1 GENE.R_Transcript_185980~~R_Transcript_185980.p1 ORF type:5prime_partial len:315 (+),score=52.00,DUF4033|PF13225.2|1.6e-34 R_Transcript_185980:3-947(+)
TATACTTATTACTACTACACTAACATAAAAGAAAGAAAGTGTCATGTCTCATTCGTCACTTCATTTAGTGGACCAAAAGAAGTTGCAAAGCTTCTGGAAATTGGAATTATGCAGAGACTTTCTCAACCTCCTCTTCAAACTCCATCCTTCCACTACTCTCTCTCCTCACACACACGTCCTCACCTTCATGTCCACTCCAAATCTCTCTCCTCCAAAACACACAGATTTCGCTTTTCATGCTCTTCCTCTGCTTCACCTGGATCGATAAATAAGGAGGAAAAATTAGAGGCTAGAAAAGAATACCAGCCTAATTTCCTTGATGATGTGTTTCTCAATACCTTCAGGACCAAACTGGTAGAGGAAGTGGGTTGGGATTCAGAGAAGCCTGGCTATGATGGGCTGATTGAAGTTGTTAATCAGCTTATGGTTGGCAGGAGTAATTTCCAGATTAATAATATTGCCGTTCGGACATTGAAATCTCTATTTCCCCCCTACCTGCTCGAATTATATCGAATGCTTATAAATCCCATAGGAGGAGGGAAACCTTCAGCTATGTTGGTTGCAAGGGTAACAGCAGTTACATGTCAATGGCTCATGGGACCTTGCTCTGTTAACTCAATCTCTCTTCCTGATGGATCCTCTTGCAAAAGTGGGGTCTTTGTGGAGAGATGCAAGTACTTGGAGGAAAGCAAATGTGCAGGAATATGTGTTAATACTTGCAAGTTCCCGACACAGGCCTTCTTTAAGGATGAAATGGGGGTTCCACTGTACATGGAGCCAAACTTTAGCGATTGTAGCTGTCAGTTCAACTTTGGAGTTTCTCCTCCTTCCCCAGAAAATGATAGCATCCTAAAAGAACCATGTTTGGAGATTTGCCCAAATGCCTCCCGACGAAGAAACAACATGAGCAGCATGTCTAGTCCAGAACATTGTCCCAAGTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_185980.p1 GENE.R_Transcript_185980~~R_Transcript_185980.p1 ORF type:5prime_partial len:315 (+),score=52.00,DUF4033|PF13225.2|1.6e-34 R_Transcript_185980:3-947(+)
YTYYYYTNIKERKCHVSFVTSFSGPKEVAKLLEIGIMQRLSQPPLQTPSFHYSLSSHTRPHLHVHSKSLSSKTHRFRFSCSSSASPGSINKEEKLEARKEYQPNFLDDVFLNTFRTKLVEEVGWDSEKPGYDGLIEVVNQLMVGRSNFQINNIAVRTLKSLFPPYLLELYRMLINPIGGGKPSAMLVARVTAVTCQWLMGPCSVNSISLPDGSSCKSGVFVERCKYLEESKCAGICVNTCKFPTQAFFKDEMGVPLYMEPNFSDCSCQFNFGVSPPSPENDSILKEPCLEICPNASRRRNNMSSMSSPEHCPKL*

Click here to download the sequence:
Link to NCBI Protein BLAST