Transcript Information: R_Transcript_18605.p1


Annotated TAIR IDAT1G21880.2
Annotated Gene Namelysm domain GPI-anchored protein 1 precursor
Annotated Gene Symbol(s)LYM1
Annotation TypeOrtholog
Chromosome Positionchr1:7680689-7682526 | Forward length=416
E-Value4.2E-189
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.686799040551
Replicate 223.596309579999
Replicate 330.827759007906
Condition 2: 8 Hour
Replicate 115.732740328253
Replicate 213.374733063887
Replicate 316.794480854377
Condition 3: 24 Hour
Replicate 128.589979561603
Replicate 225.9200822943
Replicate 335.030555398422


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18605.p1 GENE.R_Transcript_18605~~R_Transcript_18605.p1 ORF type:complete len:428 (+),score=70.07,LysM|PF01476.16|1.8e+03,LysM|PF01476.16|2.4e-06,LysM|PF01476.16|6.5e-09 R_Transcript_18605:224-1507(+)
ATGCTAAACCCAAAACCCACTTCAAAGTTTCCACCTTTGACCTTCATCTTGTTCCAACTCTTGTCAATTCTTACCCTTGTGAGCTCAAAATCAACCATTGAACCTTGCTCTAACTCAGACTCTTGCAATGCTATGTTGGGCTACACTCTCTACACTGACCTCAAAGTATCCGAGGTAGCATCTCTCTTTGGAATTGACCCAATTGCCCTCCTTACAGCTAATGCCATTGACATTTCTTACCCAGATGTTGAAAACCACATCTTGCCGTCTCAGCTCTTTGTCAAGGTCCCTATAAGTTGTTCTTGTGTTGATGGTATTAGAAAATCAGTCTCTACCCACTACAAGACTAGGCCTTCTGACACTCTTGCTTCAATTGCTGAGTCAATTTATGGGGGTTTAGTTTCTGCTGACCAGCTTAGAGAGGCTAATTCCATTTCTGACCCTTCTGCTCTTGATGTTGGGCAGTCATTAGTTGTGCCTTTGCCTTGTACTTGTTTTAATAACACTGATAACTTGTTGCCAGCTATATACTTGTCCTATGTTGTTCAGCCTGTTGATACTTTGGCTGGGATTGCTGGGAGATATCGGACTACTATTACTGATTTGATGAATGTTAATTCTCTTGGGAGTACTGCAATTGCTCCTGGTGATATCATTTCTGTTCCATTGTCAGCCTGTGATTCAAAATTCCCCACATTTGCTTCTGATTATGGGTTGATTGTTCCAAATGGAAGCTATGCGATCACTGCAAGTCATTGCGTACAGTGTAGCTGTGGCCCAGGCAGTCGCAGTTTGTATTGCATGCCAGCAACACTGGCAGTATCTTGCTCCAGCATGCAATGCCGAGGCAGCAACCTGATGCTGGGTAATATAACAATGCAGCCAAGCAGCGCCGGCTGTAATGTTACTTCTTGTAGTTACGGTGGTTACATGAATGGCACAATAATGACAACGTTGTCCACAGCCCTCCAACCTCATTGCCCAGGGGCTGTGCAATTTCCAGCAGTAATTCCACCACCTACTACTGCTACCCGAGCATCTATGTTTGCTCCAGCCCCAGCACCATCATCTGCCAGATCAAGAGGACCCGGAGGAGCTACATTTCCCAGATCCACAGGCGCAGCTGTTCCCCCAGTGGGTTCATTTCCTGCTAGTGGTCCAGCTGCTAGCACAGCTGGGAGTCTCACATCGGGTTGCTCTTTGGTGACCCCATTCTCCACTTCCCAGTTAATCGTTGCTCTATATGCTCTTGTTGTATGCATGGTTGCTAGCAATGCTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18605.p1 GENE.R_Transcript_18605~~R_Transcript_18605.p1 ORF type:complete len:428 (+),score=70.07,LysM|PF01476.16|1.8e+03,LysM|PF01476.16|2.4e-06,LysM|PF01476.16|6.5e-09 R_Transcript_18605:224-1507(+)
MLNPKPTSKFPPLTFILFQLLSILTLVSSKSTIEPCSNSDSCNAMLGYTLYTDLKVSEVASLFGIDPIALLTANAIDISYPDVENHILPSQLFVKVPISCSCVDGIRKSVSTHYKTRPSDTLASIAESIYGGLVSADQLREANSISDPSALDVGQSLVVPLPCTCFNNTDNLLPAIYLSYVVQPVDTLAGIAGRYRTTITDLMNVNSLGSTAIAPGDIISVPLSACDSKFPTFASDYGLIVPNGSYAITASHCVQCSCGPGSRSLYCMPATLAVSCSSMQCRGSNLMLGNITMQPSSAGCNVTSCSYGGYMNGTIMTTLSTALQPHCPGAVQFPAVIPPPTTATRASMFAPAPAPSSARSRGPGGATFPRSTGAAVPPVGSFPASGPAASTAGSLTSGCSLVTPFSTSQLIVALYALVVCMVASNAF*

Click here to download the sequence:
Link to NCBI Protein BLAST