Transcript Information: R_Transcript_186080.p1


Annotated TAIR IDAT5G51190.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20800708-20801373 | Reverse length=221
E-Value6E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7954985245966
Replicate 22.0807144556692
Replicate 33.0955050805611
Condition 2: 8 Hour
Replicate 12.4265271569342
Replicate 24.2304371050892
Replicate 32.7799764013205
Condition 3: 24 Hour
Replicate 14.343368934971
Replicate 20.99348013020618
Replicate 33.5493575167942


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_186080.p1 GENE.R_Transcript_186080~~R_Transcript_186080.p1 ORF type:internal len:111 (+),score=5.55,AP2|PF00847.16|2.7e-10 R_Transcript_186080:2-331(+)
CACCAGCAGGTGGTAGACCTAACGACGTCGTTTCCGTCGCCGGGGTTCGGTTCCAAGTCCAAGTTCAACGAGAGGAAGCCGTCGATGAAGATCTCGCTGCCGTCTCCCGTGAAGAAATTCGAGGTGATCGAGTTCGTGCCTGAGCCGACTCAGCAGAACTCGGCTGCGCTTCAGCAGCAGAGTCAGGAGGACGAGTCAGCTCGGAGGCACTACAGAGGTGTCAGGAGAAGGCCGTGGGGTAAGTATGCTGCCGAGATTCGGGACCCAAACAAGAGGGGGTCTCGAGTCTGGCTCGGTACTTACGACACAGCTGTCGAGGCGGCACGAGCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_186080.p1 GENE.R_Transcript_186080~~R_Transcript_186080.p1 ORF type:internal len:111 (+),score=5.55,AP2|PF00847.16|2.7e-10 R_Transcript_186080:2-331(+)
HQQVVDLTTSFPSPGFGSKSKFNERKPSMKISLPSPVKKFEVIEFVPEPTQQNSAALQQQSQEDESARRHYRGVRRRPWGKYAAEIRDPNKRGSRVWLGTYDTAVEAARA

Click here to download the sequence:
Link to NCBI Protein BLAST