Transcript Information: R_Transcript_186111.p1


Annotated TAIR IDAT5G57750.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23399668-23400300 | Forward length=210
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1334629687334
Replicate 21.3633961309284
Replicate 32.9749009865133
Condition 2: 8 Hour
Replicate 11.9079894764087
Replicate 20.58080212574508
Replicate 30.58933800715542
Condition 3: 24 Hour
Replicate 13.1306100765051
Replicate 20.14321596682193
Replicate 31.9897913351725


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_186111.p1 GENE.R_Transcript_186111~~R_Transcript_186111.p1 ORF type:complete len:154 (+),score=24.47,zf-RING_2|PF13639.2|8.7e-12,zf-RING_11|PF17123.1|2.8e-08,zf-RING_11|PF17123.1|4.2e+02 R_Transcript_186111:357-818(+)
ATGGTAATGGAAATTATCATATCTGTGGTGTTACTGTTTGTGGGTATAGCTGTTTTGATAATAATTCATATTTGCATAGTTGGGAGGGCATTCAGGAGGGGTTTTGTGGGCTCAGAAGGGGTGTTACAGAATGGAAGTATCCCAATAATTAAGGGTAGTACAACAGGAATGAGCCCTAAGGAAGTAAAGAAACTTGCTTGTTTTGAGTACAAGGAATTGGGGAGTGGCCCTACGGATTGTGCTGTTTGCTTGGATAACTTTAAGTTGGGTGATAAGTGTAGGACACTCCCTAATTGTCACCACTGCTTTCATGTTCTTTGTATTGATGTCTGGTTGATCAAGACCCCCTTTTGTCCCATTTGTCGAACCTCCGCCAAGCCGTCGCCTAAACTTTGCTTGGATGTTGGTGAAGGAAGTAATGCTACAATATCCAATATTGGTGTTGGAGATGAAATGTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_186111.p1 GENE.R_Transcript_186111~~R_Transcript_186111.p1 ORF type:complete len:154 (+),score=24.47,zf-RING_2|PF13639.2|8.7e-12,zf-RING_11|PF17123.1|2.8e-08,zf-RING_11|PF17123.1|4.2e+02 R_Transcript_186111:357-818(+)
MVMEIIISVVLLFVGIAVLIIIHICIVGRAFRRGFVGSEGVLQNGSIPIIKGSTTGMSPKEVKKLACFEYKELGSGPTDCAVCLDNFKLGDKCRTLPNCHHCFHVLCIDVWLIKTPFCPICRTSAKPSPKLCLDVGEGSNATISNIGVGDEML*

Click here to download the sequence:
Link to NCBI Protein BLAST