Transcript Information: R_Transcript_18612.p1


Annotated TAIR IDAT5G14170.1
Annotated Gene NameSWIB/MDM2 domain superfamily protein
Annotated Gene Symbol(s)CHC1
Annotation TypeOrtholog
Chromosome Positionchr5:4568696-4570444 | Reverse length=534
E-Value2.4E-268
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.06854953442
Replicate 221.924313694367
Replicate 325.522239863116
Condition 2: 8 Hour
Replicate 121.509682467469
Replicate 226.890710575127
Replicate 333.562094038432
Condition 3: 24 Hour
Replicate 130.610409636939
Replicate 226.685644735008
Replicate 332.368005273625


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18612.p1 GENE.R_Transcript_18612~~R_Transcript_18612.p1 ORF type:complete len:543 (+),score=128.88,SWIB|PF02201.14|9.2e-24 R_Transcript_18612:500-2128(+)
ATGTCAGCAAATAACAGTAATACTAATCAGGCCAAGAACATAGTAGGGTCTTCATTTGGAAATACTGGAATGGTGAACCCTAATTTACCCCCAAATTTTTCCCAAGCTCAAGGTCAAGGTCAACCTCAACCACATTTAGGGTTTAACTTTCAGCTGGCCCAAGCCCATGCCCTTGCACAGGCCCAATCCAAAGCCCAAGCTGCAGCTGCCCATGCTCAGCTTCTGCAGGCTCAGGGCTTGTCCCTTAATCAGTCCCAAGCAATGGGGATTGCTAATTTGGGGACATCTTCGCCTTCAATTTCGGGGTTTAGTGCCAAAAGAGTTCCTCAAAAACCCCCTGTTCGGCCTCCCGGAGGACCTTCACTTGGTGGTGGTGGTGGAGGTGTTCATATGATGTCGTCCCCTTCACCTATGAAGAGTGCAATGGAGCTTACCCCGGCTTCTGCTCGTAGGAAGAAACAGAAACCACCAGAAAAGCAGTTGAGTGAGAGAGTGGCTGCTATATTGCCTGAATCTGCTTTGTATACGCAGCTACTTGAGTTTGAGTCTAGGGTTGATGCTGCTTTGGCTAGAAAGAAGATTGACATTCAAGAGGCTTTGAAAAACCCTCCTTGTGTTCAGAAAACTCTTAGGATTTATGTGTTCAATACGTTTGCAAATCAGAGTCAGTCTATTCCTAAGAAGCCTAATGCCGAGCCCCCTACTTGGACACTTAAGATCATAGGGAGGATCTTGGAAGAGGGTATGGATCCTGAACAGGTTGCTAATATGAAGCCTAACCCAATGTACCCGAAGTTCTCTTCGTTTTTCAAGAGAGTCACAATTGCGTTAGATCAGAGATTGTATCCGGAGAACCATTTGATAGTGTGGGAGAATTCGAGAGCATCTGCTCCTCAGGAGGGGTTTGAGGTCAAGAGGAAGGGGGACAAGGAGTTTACAGTGAACATTTGGTTTGATATGAACTATTTGCCTGAGAAATTCAAGCTTTCGCCTGCTTTGACTGAACTTCTTGGCATAGAAGCTGAGACTCGCCCTAGAATTATTGCTGCAATCTGGCATTATGTGAAGGCTCGAAAGTTGCAGAACCCAAATGACCCAACCTTCTTCAATTGCGACCCTCAGCTTCAGAAGGTTTTTGGGGAAGATAAGATGAAGTTTACCATGGTGTCTCAGAAGATATCGCAGCATTTAACCCCTCCTCCGCCTATACAAGTGGAGCATCACATCAAACTTTCAGGTAATAGCCCTGCTGGTGATGCTTGTTACGATATAATGGTAGATATACCTTTCCCCATACAGAGAGAACTCTCTATGCTATTGGCAAATACTGAAAAGAACAAGGAGATTGAGGCCTGTGATGAAGCAATATGTGGGGCTATAAGGAAGATTCATGAGCATCGCAGAAGAAGAGCATTCTTTCTTGGTTTTAGTCAGTCACCTGTGGAATTCATCAATGCATTGATAGAATCTCAAAGCAGAGACTTGAAACTTGTGTCAGGGGAACCTGGTCGCAGTGCAGAAAGAGAACGCCGATCAGATTTCTTTAACCAGCCCTGGGTTGAGGATGCAGTTATTCGTTATTTAACACGCAAGCCAGCTAATGGAACCGACGCTCCTGGAAGCACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18612.p1 GENE.R_Transcript_18612~~R_Transcript_18612.p1 ORF type:complete len:543 (+),score=128.88,SWIB|PF02201.14|9.2e-24 R_Transcript_18612:500-2128(+)
MSANNSNTNQAKNIVGSSFGNTGMVNPNLPPNFSQAQGQGQPQPHLGFNFQLAQAHALAQAQSKAQAAAAHAQLLQAQGLSLNQSQAMGIANLGTSSPSISGFSAKRVPQKPPVRPPGGPSLGGGGGGVHMMSSPSPMKSAMELTPASARRKKQKPPEKQLSERVAAILPESALYTQLLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYVFNTFANQSQSIPKKPNAEPPTWTLKIIGRILEEGMDPEQVANMKPNPMYPKFSSFFKRVTIALDQRLYPENHLIVWENSRASAPQEGFEVKRKGDKEFTVNIWFDMNYLPEKFKLSPALTELLGIEAETRPRIIAAIWHYVKARKLQNPNDPTFFNCDPQLQKVFGEDKMKFTMVSQKISQHLTPPPPIQVEHHIKLSGNSPAGDACYDIMVDIPFPIQRELSMLLANTEKNKEIEACDEAICGAIRKIHEHRRRRAFFLGFSQSPVEFINALIESQSRDLKLVSGEPGRSAERERRSDFFNQPWVEDAVIRYLTRKPANGTDAPGST*

Click here to download the sequence:
Link to NCBI Protein BLAST