Transcript Information: R_Transcript_186162.p1


Annotated TAIR IDAT1G15215.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5238096-5239770 | Forward length=258
E-Value8.3E-81
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.644198676012
Replicate 222.703316710306
Replicate 324.396606708097
Condition 2: 8 Hour
Replicate 121.101639710634
Replicate 227.451163886334
Replicate 323.2429160383
Condition 3: 24 Hour
Replicate 126.317486334197
Replicate 222.324225462414
Replicate 328.026938928344


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_186162.p1 GENE.R_Transcript_186162~~R_Transcript_186162.p1 ORF type:complete len:246 (+),score=54.24,SAWADEE|PF16719.1|1.9e+03,SAWADEE|PF16719.1|4.6e-41 R_Transcript_186162:123-860(+)
ATGATACAACCAACAACAGTGGAAGCCACTTCACTTCAAGCTGAACAACTTATGGAGTCCACTCCCTCAGTATTCTCTGATTCTGAGATTGCAGAGATGGAGAATTTATTCAGGGATGTAGGAAAGGATTCACTTAATCAGGAATTCTGCCAAGAACTTGCAACAACTTTTAGTTCCTCCTTATGTCGCGTTGGAAAACCAACTATCAGCTGGCAACAGGTGCAAAGCTGGTTTCAAGAAAAACAAAAAGATTTATATGCATTGGACGCTTGTACTCCAAGGAAAATGCCCGAGACTTCTATCGTGCTTAAAGGTCGAACAGCAGCTGATGAACTCGCAGAATTGGCTTTTGAGGCCAAATCTTCAAGGGACAATGCATGGTATGATGTTGCTGCATTTCTTAACCATAGAGTTCTTAGTACTGGAGAACTTGAGGCTCGTGTGCGGTTTGCTGGTTTTGGCAACTCCCATGACGAATGGGTGAATGTAAGGCATGGCCTACGTGAGCGTTCAGTTCCTCTGGAACCTTCAGAATGCCATAAGGTCAAGGTTGGTGACCTCGTGCTATGCTTCCAGGAAAGACCAGATTATGCTGTATATGTTGATGCACATGTCATGGAAATCCAAAGGAGATTGCATGACATAAAGGGATGTAGATGCATCTTTGTGGTTCGGTTTGATGACGATAAGACAGAGGAGAAGGTCCAGCTGAACAAGATATGTTGTAGGCCCAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_186162.p1 GENE.R_Transcript_186162~~R_Transcript_186162.p1 ORF type:complete len:246 (+),score=54.24,SAWADEE|PF16719.1|1.9e+03,SAWADEE|PF16719.1|4.6e-41 R_Transcript_186162:123-860(+)
MIQPTTVEATSLQAEQLMESTPSVFSDSEIAEMENLFRDVGKDSLNQEFCQELATTFSSSLCRVGKPTISWQQVQSWFQEKQKDLYALDACTPRKMPETSIVLKGRTAADELAELAFEAKSSRDNAWYDVAAFLNHRVLSTGELEARVRFAGFGNSHDEWVNVRHGLRERSVPLEPSECHKVKVGDLVLCFQERPDYAVYVDAHVMEIQRRLHDIKGCRCIFVVRFDDDKTEEKVQLNKICCRPK*

Click here to download the sequence:
Link to NCBI Protein BLAST