Transcript Information: R_Transcript_18627.p1


Annotated TAIR IDAT4G01880.1
Annotated Gene Namemethyltransferases
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:810810-812882 | Reverse length=453
E-Value5.9E-189
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.798479766376
Replicate 23.6168123759619
Replicate 35.6370047775767
Condition 2: 8 Hour
Replicate 15.5326003572075
Replicate 25.7527995788285
Replicate 35.2789919030208
Condition 3: 24 Hour
Replicate 17.9607608955126
Replicate 26.9570279721955
Replicate 36.4145174809475


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18627.p1 GENE.R_Transcript_18627~~R_Transcript_18627.p1 ORF type:complete len:447 (+),score=89.89,TRM13|PF05206.10|8.4e-85,zf-TRM13_CCCH|PF11722.4|1.9e-11,zf-TRM13_CCCH|PF11722.4|1.6e+04,zf-U11-48K|PF05253.8|1.5e-09,Methyltransf_32|PF13679.2|3.7e-06 R_Transcript_18627:218-1558(+)
ATGGACAAACGGTCCTGCCAGTTTTGGTTGCCGAAGAAGAACAGATTCTGCGCCAATACTCCCCTTAACAACTCCATGTTTTGCGGGAATCACACCACAAGGTCTGATGGCAAGTGGGTTCCTTGCCCAATTGATCCTTCTCATTCTGTGCTTGAAGACAATCTGGAGGGACATATCAAGAAATGCCCACTATTGAAACAAGCTCAGACCTTGTCTCTTCAGCCTTACTATCACAAGGGCATTAACCGAGGCACGGATGGAGATGAACAGCTTGACTTTACTTCTGAGATGAAGAGGAATTGGGTCTACAATCTCACCCTTGCTCAATTCTCTGACTTAATTTCCAAGATTCGTGCTGTTCACAGCTCCATTTGCAGTGCTATTGGGTCTTCTTATAAGGTGCCTGAAGCCTGTGATATCTGGATTAAAAGACAAATAGATAGAAAAATACCCTACCAAGAGAAACATGTCTTGCAACAGGCATCCATAGTTGGAAACTTGGAAGACATGGGAGTTTTGAGCAATTCTGATCAAACTTTGGGGAAAGAAGAACGTGATTCGCCAGGACCAGGACCACCTTGCATTGATAATGATAGCCCAGCTGTTGTTGAGTTTGGAGCTGGGAGGGGTTACTTGACACAAATACTGGCTGATTGTTATGGCATCAAAAACGTGTTCCTTGTTGAGCACAAATCATACAAGCTGAAGGCTGATCGAAGTCTACGGCAGAAAGAGAGCTTGGTCTTGGAGCGGCTAAGAATTGATATTGAGGACTTGAATTTGAATGCTGTGAACTCGTTGAAGGGACTAAGTTACCTGGCTATTGGTAAACATCTTTGCGGACCTGCAACAGACTTGACCCTTAGGTGTTGTCTTGCTGAACACCAAGATAAAGACTATGGGACAGAGATGGGTGTTCGTCAGCATCTCAAAGGCATTGCTGTGGCAACCTGTTGCCACCATCTCTGCCAATGGAAACACTATACAAATAAAAGATACTTAATTAACCTGGGATTCTCTAAAGAAGACTTCCATGCTATCTCTTGGTTCACCAGCTGGGCAGTAGATGCTGACCATGGGTCAGATCTTTCTGATGATAGCTATACACAATCACCATTTCCCCCTGGTGATAACAAGAACACTAGATGTGCAAGTGGAGTTGAAGAAACATTAAGAGATATAAAGCCTGTGGATAGGGCAACTTTGGGGTTCATGTGCAAAGATATTATTGATATGGGGAGGTTGATGTGGGTTAAGGAACATGGACTGGAAGCTAAACTAGTCAAGTATGTTCCATCAACTATTTCTCCAGAAAATCGTTTACTTGTTGCAAGGCAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18627.p1 GENE.R_Transcript_18627~~R_Transcript_18627.p1 ORF type:complete len:447 (+),score=89.89,TRM13|PF05206.10|8.4e-85,zf-TRM13_CCCH|PF11722.4|1.9e-11,zf-TRM13_CCCH|PF11722.4|1.6e+04,zf-U11-48K|PF05253.8|1.5e-09,Methyltransf_32|PF13679.2|3.7e-06 R_Transcript_18627:218-1558(+)
MDKRSCQFWLPKKNRFCANTPLNNSMFCGNHTTRSDGKWVPCPIDPSHSVLEDNLEGHIKKCPLLKQAQTLSLQPYYHKGINRGTDGDEQLDFTSEMKRNWVYNLTLAQFSDLISKIRAVHSSICSAIGSSYKVPEACDIWIKRQIDRKIPYQEKHVLQQASIVGNLEDMGVLSNSDQTLGKEERDSPGPGPPCIDNDSPAVVEFGAGRGYLTQILADCYGIKNVFLVEHKSYKLKADRSLRQKESLVLERLRIDIEDLNLNAVNSLKGLSYLAIGKHLCGPATDLTLRCCLAEHQDKDYGTEMGVRQHLKGIAVATCCHHLCQWKHYTNKRYLINLGFSKEDFHAISWFTSWAVDADHGSDLSDDSYTQSPFPPGDNKNTRCASGVEETLRDIKPVDRATLGFMCKDIIDMGRLMWVKEHGLEAKLVKYVPSTISPENRLLVARQ*

Click here to download the sequence:
Link to NCBI Protein BLAST