Transcript Information: R_Transcript_186370.p1


Annotated TAIR IDAT4G34110.1
Annotated Gene Namepoly(A) binding protein 2
Annotated Gene Symbol(s)PAB2, PABP2, ATPAB2
Annotation TypeHomolog
Chromosome Positionchr4:16336732-16339892 | Forward length=629
E-Value3E-101
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4141933712665
Replicate 21.2484286734015
Replicate 30.33018720859319
Condition 2: 8 Hour
Replicate 10.088237351161244
Replicate 20.20144938595663
Replicate 30.3597616519356
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.23662383445294


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_186370.p1 GENE.R_Transcript_186370~~R_Transcript_186370.p1 ORF type:complete len:555 (+),score=120.53,RRM_1|PF00076.18|2.2e-18,RRM_1|PF00076.18|9.4e-20,RRM_1|PF00076.18|2.6e-18,RRM_1|PF00076.18|5.3e-17,RRM_6|PF14259.2|1.4e-05,RRM_6|PF14259.2|2.9e-11,RRM_6|PF14259.2|1.5e-13,RRM_6|PF14259.2|1e-10,RRM_5|PF13893.2|4.5e-05,RRM_5|PF13893.2|1.8e-05,RRM_5|PF13893.2|5.4e-08,RRM_5|PF13893.2|8.5e-07,PABP|PF00658.14|5.9e+03,PABP|PF00658.14|5.9e-18,Nup35_RRM|PF05172.9|1.9e+02,Nup35_RRM|PF05172.9|3.1,Nup35_RRM|PF05172.9|34,Nup35_RRM|PF05172.9|0.027,RRM_7|PF16367.1|10,RRM_7|PF16367.1|1.4e+02,RRM_7|PF16367.1|7,RRM_7|PF16367.1|33 R_Transcript_186370:74-1738(+)
ATGCAAAATACCACCGAAACCACCACACCAACCCCCCAAACCACCAATTCTCAAACCTTCCAAACAGGATCCTTGTATGTTGGAGATCTCGAACCAAATGTGACAGAATCAATCCTTTTTGAAACTTTTAGAAAGGTTGGACCTGTTGCTTCAATTAGAGTTTGCAGAGATTCCAGCACAAGAAGATCTTTGGGGTATGCTTACGTGAACTACCACAGAGTCGAAGATGCAGAAAGAGCTCTCGATACCTTGAACTACACTGCAATTGGAGAAGGTAAGCCATGCCGTATCATGTGGTCCCAACGTGATCCATCTTTGAGAAAGAGTGGACAAGGTAACATCTACATCAAAGACTTGCACCCAAGTATCCAAAGTCAGGATCTTTATGACAACTTTTCCCAATTTGGAACCATTTTGTCTTGCAAGGTTGAGACTGAGCTTGATGGACGTAGCAAAGGATTTGGTTATGTTCATTTTGAGAGCGTCGAAGCTGCAAAGAAGGCAATAGAAGGAGTGAATGGAATGGAGATTGAAGGAAAGGTTGTGCATGTCTTTGAGTTCCAAACCAAGAAACAAAGATTGGGAGGATCCCAAAATGTGCCAAGATTCACCAATGTCTACGTGAAGAACTTGAATCCAAAGGTTACTGAAAACGAATTGAGAGAGAAATTCTCAGAGTATGGTAACATCACCTCTCTTGTGATCATGTTTGACAACAACAATGTCAGCAAGGGATTTGGTTTCATCAACTTCAGTACCTCTGAAGAGGCTCAAAGGTCTGTCGAGAAGGCTCACGATACTGAGTTTGCTGGTCAAAAGATTTATGTTTGCAAGGCTCAAAAGAGATCCGAGAGATTGAACGATTTGAGAAAGCAATTCGAGCAAAGAAAGTTGAAATATCAAGAATCCAACCTCTATATCAAGAATTTGGATGATCAGATCGATGACAACAAGCTTTTTGAGCTTTTTTCCAAGTACGGTAAAATCATCTCTGCCAAGGTGATGAAGGATGAGAACAATTTCAGCAAGGGTTTTGGTTTCGTTTGCTTTTCTACTTCTGAAGAGGCTCAAAGGGCATTCAACGAAAATGGAAGAATGCACTTTACCAAGCCTTTGTATGTTGCTCTTGCTCAACGCAAAGAGATTCGTACCGCTCAACTTCAGGCTCAATATGCTCACAGACAAATGCAGAAGAATCTCCCTACCCCTTTCAACAACAACAATTTTCCTAACCAACGCAACCCTCAGAACAACCACTTCAATCCTAACAGACACTACCAAAAGACCACCAAGAATCCCAACTACAACAACAACAACTTTGGGCGTCAGAAGAAGACCAACCAAATCAACAGAAATCAACAACACTTTAACCAACCTGAGACTGAGAAATCTTCCAACATGACCAACATCATCTCTGTTCTCCAACAAACCCAAGATCCTGAACAAAGAAAGAGAATCATTGGTGACTTTCTCTACCTCAAGATCGATGAATTTTTCAAGAACAACCAAAACACTGCTGGAGATGCTGGAAAGATCACCGGTATGCTTCTCGACAGTTTGGACGAACAAGAACTTCTCAATCTTGCAGAAGATAACCAAGAGTTGGTCAGCAAGATCGATGAGGCTATCCAAGTCCTCCAAGAGCATCAAGAGAACCAAAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_186370.p1 GENE.R_Transcript_186370~~R_Transcript_186370.p1 ORF type:complete len:555 (+),score=120.53,RRM_1|PF00076.18|2.2e-18,RRM_1|PF00076.18|9.4e-20,RRM_1|PF00076.18|2.6e-18,RRM_1|PF00076.18|5.3e-17,RRM_6|PF14259.2|1.4e-05,RRM_6|PF14259.2|2.9e-11,RRM_6|PF14259.2|1.5e-13,RRM_6|PF14259.2|1e-10,RRM_5|PF13893.2|4.5e-05,RRM_5|PF13893.2|1.8e-05,RRM_5|PF13893.2|5.4e-08,RRM_5|PF13893.2|8.5e-07,PABP|PF00658.14|5.9e+03,PABP|PF00658.14|5.9e-18,Nup35_RRM|PF05172.9|1.9e+02,Nup35_RRM|PF05172.9|3.1,Nup35_RRM|PF05172.9|34,Nup35_RRM|PF05172.9|0.027,RRM_7|PF16367.1|10,RRM_7|PF16367.1|1.4e+02,RRM_7|PF16367.1|7,RRM_7|PF16367.1|33 R_Transcript_186370:74-1738(+)
MQNTTETTTPTPQTTNSQTFQTGSLYVGDLEPNVTESILFETFRKVGPVASIRVCRDSSTRRSLGYAYVNYHRVEDAERALDTLNYTAIGEGKPCRIMWSQRDPSLRKSGQGNIYIKDLHPSIQSQDLYDNFSQFGTILSCKVETELDGRSKGFGYVHFESVEAAKKAIEGVNGMEIEGKVVHVFEFQTKKQRLGGSQNVPRFTNVYVKNLNPKVTENELREKFSEYGNITSLVIMFDNNNVSKGFGFINFSTSEEAQRSVEKAHDTEFAGQKIYVCKAQKRSERLNDLRKQFEQRKLKYQESNLYIKNLDDQIDDNKLFELFSKYGKIISAKVMKDENNFSKGFGFVCFSTSEEAQRAFNENGRMHFTKPLYVALAQRKEIRTAQLQAQYAHRQMQKNLPTPFNNNNFPNQRNPQNNHFNPNRHYQKTTKNPNYNNNNFGRQKKTNQINRNQQHFNQPETEKSSNMTNIISVLQQTQDPEQRKRIIGDFLYLKIDEFFKNNQNTAGDAGKITGMLLDSLDEQELLNLAEDNQELVSKIDEAIQVLQEHQENQN*

Click here to download the sequence:
Link to NCBI Protein BLAST