Transcript Information: R_Transcript_186454.p1


Annotated TAIR IDAT1G06680.1
Annotated Gene Namephotosystem II subunit P-1
Annotated Gene Symbol(s)PSBP-1, OEE2, PSII-P, OE23
Annotation TypeOrtholog
Chromosome Positionchr1:2047940-2049186 | Forward length=263
E-Value8.6E-140
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.791082780096
Replicate 28.9034944803289
Replicate 311.960796529637
Condition 2: 8 Hour
Replicate 110.150785785092
Replicate 28.9868101070588
Replicate 35.6292969645504
Condition 3: 24 Hour
Replicate 18.1369443338698
Replicate 24.5366829996441
Replicate 37.4113430427152


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_186454.p1 GENE.R_Transcript_186454~~R_Transcript_186454.p1 ORF type:5prime_partial len:316 (+),score=84.51,PsbP|PF01789.12|9.7e+03,PsbP|PF01789.12|3.8e-41 R_Transcript_186454:3-950(+)
ATCTTTTCTTCTCAAATCAAAACCAATCAATTTTCTTCATCACAAATCACCTCTTTTCTTTACTTTCTCTTATACCCACAAACAAACTCCCACAAAGGAGCAGAAAAAAAAAATATAGTGAAGAGAAAGAAAAGAGAGGGTGAAGAAGAAGAAGAAGAAATGGCATCAACTGCATGCTTCTTACACCACCATGCAGCCATCTCTGGGCCAGCAACTGCCAGAAGCCCATCTCAAAGGTACCCAGCTGTGAGCACCAGGCCCAATTTGTTTGTCTGCAAGGCCCAAAAGCAGGAAGAAGAGGCCCATGGTAGTATCTCTAGACGTTTGGCCCTCACTGTCCTCATTGGTGCTGCTGCTGTTGGCTCTAAGGTCTCCCCTGCTGATGCTGCCTATGGAGAAGCTGCCAATGTGTTCGGAAAGCCAAAGACAAACACAGACTTCATACCATACAGTGGAGAAGGATTCAAGCTGTCGATCCCCTCGAAATGGAACCCAAGCAAAGAGGTGGAGTACCCAGGACAGGTTTTGAAGTTCGAGGATAACTTCGATGCCACCAGCAATGTGACTGTCATGATCACCCCAACTGACAAGAAAACCATCACCGACTTCGGTTCCCCTGAACAGTTCCTCTCTCAGGTTAACTACTTGTTGGGACAACAAGCCTACTTTGGAAAGACTGATGCTGAGGGTGGTTTTGATGCAGATGTGGTTGCATCAGCAAACGTGCTTGAAACCGACACCCCAGTGATCGACGGGAAGCAATATTACTTCTTGTCAGTGTTGACAAGAACAGCTGATGGTGATGAAGGTGGCAAACACCAACTGATTACAGCCACAGTCAAGGATGGTAAGCTTTACATCTGCAAGGCTCAGGCTGGTGACAAGAGATGGTTCAAGGGAGCGAGGAGGTTCGTTGAGAACACTGCTAGTTCTTTCAGTGTTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_186454.p1 GENE.R_Transcript_186454~~R_Transcript_186454.p1 ORF type:5prime_partial len:316 (+),score=84.51,PsbP|PF01789.12|9.7e+03,PsbP|PF01789.12|3.8e-41 R_Transcript_186454:3-950(+)
IFSSQIKTNQFSSSQITSFLYFLLYPQTNSHKGAEKKNIVKRKKREGEEEEEEMASTACFLHHHAAISGPATARSPSQRYPAVSTRPNLFVCKAQKQEEEAHGSISRRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFIPYSGEGFKLSIPSKWNPSKEVEYPGQVLKFEDNFDATSNVTVMITPTDKKTITDFGSPEQFLSQVNYLLGQQAYFGKTDAEGGFDADVVASANVLETDTPVIDGKQYYFLSVLTRTADGDEGGKHQLITATVKDGKLYICKAQAGDKRWFKGARRFVENTASSFSVA*

Click here to download the sequence:
Link to NCBI Protein BLAST