Transcript Information: R_Transcript_186458.p1


Annotated TAIR IDAT1G06680.1
Annotated Gene Namephotosystem II subunit P-1
Annotated Gene Symbol(s)PSBP-1, OEE2, PSII-P, OE23
Annotation TypeOrtholog
Chromosome Positionchr1:2047940-2049186 | Forward length=263
E-Value5.7E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.984993746042
Replicate 211.954098047235
Replicate 315.884234099522
Condition 2: 8 Hour
Replicate 114.834502121324
Replicate 212.078140556553
Replicate 36.8896624252564
Condition 3: 24 Hour
Replicate 18.7139122324132
Replicate 27.7273899762607
Replicate 38.946798996104


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_186458.p1 GENE.R_Transcript_186458~~R_Transcript_186458.p1 ORF type:5prime_partial len:137 (-),score=35.95,PsbP|PF01789.12|3.9e-28 R_Transcript_186458:735-1145(-)
GATAACTTCGATGCCACCAGCAATGTGACTGTCATGATCACCCCAACTGACAAGCAATCCATCATCCACTACGGTTCCCCTGAAGAGTTCCTCTCTCAGGTTAACTACTTGTTGGGACAACAAGCCTACTTTGGAAAGACTGATGCTGAGGGTGGTTTCGATGCAGATGTGGTTGCAACAGCAAATGTGCTTGAAACCGACACCCCAGTGATCGACGGGAAGCAATATTACTTCTTGTCAGTGTTGACAAGAACAGCTGATGGTGATGAAGGTGGCAAACACCAACTGATTACAGCCACAGTCAAGGATGGTAAGCTTTACATCTGCAAGGCTCAGGCTGGTGACAAGAGATGGTTCAAGGGAGCGAGGAGGTTCGTTGAGAACACTGCTAGTTCTTTCAGTGTTGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_186458.p1 GENE.R_Transcript_186458~~R_Transcript_186458.p1 ORF type:5prime_partial len:137 (-),score=35.95,PsbP|PF01789.12|3.9e-28 R_Transcript_186458:735-1145(-)
DNFDATSNVTVMITPTDKQSIIHYGSPEEFLSQVNYLLGQQAYFGKTDAEGGFDADVVATANVLETDTPVIDGKQYYFLSVLTRTADGDEGGKHQLITATVKDGKLYICKAQAGDKRWFKGARRFVENTASSFSVA*

Click here to download the sequence:
Link to NCBI Protein BLAST