Transcript Information: R_Transcript_186467.p1


Annotated TAIR IDAT2G12880.1
Annotated Gene NameZinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5291523-5291882 | Forward length=119
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.859452720884
Replicate 219.57683221914
Replicate 319.293280397886
Condition 2: 8 Hour
Replicate 115.588184445288
Replicate 223.053754236265
Replicate 320.196862521276
Condition 3: 24 Hour
Replicate 119.206954215854
Replicate 217.147187193801
Replicate 322.689226266981


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_186467.p1 GENE.R_Transcript_186467~~R_Transcript_186467.p1 ORF type:internal len:355 (+),score=55.24,Retrotrans_gag|PF03732.13|1.9e-15 R_Transcript_186467:1-1062(+)
AAGTTGTTCTTGGCGATCGGTTGTCCAGCGAACTTACGAGTCAACAACGCCACCTACTACCTGCAAGAAGAAGCTGACCGTTGGTGGATTTCAGAGGGCCCTGGACTACTTGAAAGCCCCGATTTTGGTTGGGATGCCTTGAAAACTGCCTTGAGAAATCGATTTTATCCTGAGCATCTAAAAAGACAGAAGTACAATGAGTTCGTGAATCTGAGACAAGGCAGAATGACGGTTACTGAATATGCCAACAAATTCACTGATCTTGCCAGATTTGCTCCAAACTTGGTGCCCGATGAGAGATCAAAAGCACATAAGTTTGAAGACGGCCTCAATATCCACATCCAAGAGCTCCTGGGAGGTATCTGCTCCAACACCTTCCAAGAGGCTTATGGACGAGCGGCTAATTTGGCACGTATCCTCCAGAGGAAAGAGGAAATCCTTGGGAGAAACAGGAAAAGAGACAGTGGCTCTGGCTCCAACCCACATTCAAGCTCATACTCTACTGATAAGAGGCCACGTTTTAGCAATGGGAACCCAGGGACTCATGGCCAGAACCATCAGATTTCTGGAGGTGACAAGAGGAACTTTCAAGGAAACAACCATTATCAGCAGCAACGCCCTCCAACCTATCAGAGGAACCAACCCCCACAGAGAAACTGTTATAAGTGTGGAAAGCGACTTCATCCCGGTGTATCATGTGATGGCATTCCTTTCACTTGTTTTGACTGTGGAGGCAAGGGCCATAGATCCTTTGAGTGCCCTCTGAAGAAAAGGGGAACTCTGCAACAACAACAGCGCCCTAACACACTGCAAGGACAAGGTTTCCAACGCGACCAAGCTTTTGGGCCTGACAATGGAGGCTTTAGGACCAACCAGGGTTTCCATGGAGCTTCAGGTGGGACTAACAATGGCAATGGGTCCCGCCCGAATAACCCGCCCCAGAATGGTAATAGAAAAGGAGGAAACAATGGTCGCATCTTTGTGATGAACCAAGTGCAGGCAGAAGCGGACCCCAATGTTGTTACTGGTTGTACCGTAGACGGTATCGAGGAGCGTCAGGAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_186467.p1 GENE.R_Transcript_186467~~R_Transcript_186467.p1 ORF type:internal len:355 (+),score=55.24,Retrotrans_gag|PF03732.13|1.9e-15 R_Transcript_186467:1-1062(+)
KLFLAIGCPANLRVNNATYYLQEEADRWWISEGPGLLESPDFGWDALKTALRNRFYPEHLKRQKYNEFVNLRQGRMTVTEYANKFTDLARFAPNLVPDERSKAHKFEDGLNIHIQELLGGICSNTFQEAYGRAANLARILQRKEEILGRNRKRDSGSGSNPHSSSYSTDKRPRFSNGNPGTHGQNHQISGGDKRNFQGNNHYQQQRPPTYQRNQPPQRNCYKCGKRLHPGVSCDGIPFTCFDCGGKGHRSFECPLKKRGTLQQQQRPNTLQGQGFQRDQAFGPDNGGFRTNQGFHGASGGTNNGNGSRPNNPPQNGNRKGGNNGRIFVMNQVQAEADPNVVTGCTVDGIEERQD

Click here to download the sequence:
Link to NCBI Protein BLAST