Transcript Information: R_Transcript_186481.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value8E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.0494194032017
Replicate 26.8056973763173
Replicate 36.4770775271879
Condition 2: 8 Hour
Replicate 18.5278357230061
Replicate 28.5588202909366
Replicate 38.6376629848738
Condition 3: 24 Hour
Replicate 16.6498476107833
Replicate 27.9855247707263
Replicate 36.8682107810609


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_186481.p1 GENE.R_Transcript_186481~~R_Transcript_186481.p1 ORF type:3prime_partial len:290 (-),score=59.76,PPR_2|PF13041.2|5.7e-05,PPR_2|PF13041.2|1e-18,PPR_2|PF13041.2|4.6e-22,PPR_2|PF13041.2|6.8e-19,PPR_2|PF13041.2|6.7e-18,PPR_2|PF13041.2|1.9e-16,PPR_2|PF13041.2|2.7e-16,PPR_2|PF13041.2|1.2e-06,PPR_1|PF12854.3|1.4e-09,PPR_1|PF12854.3|3.2e-17,PPR_1|PF12854.3|6.4e-10,PPR_1|PF12854.3|9.4e-15,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|3.6e-13,PPR_1|PF12854.3|0.00095,PPR|PF01535.16|2.2e-08,PPR|PF01535.16|6.3e-11,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|2e-08,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|4.7e-10,PPR|PF01535.16|0.019,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|4.3e-07,PPR_3|PF13812.2|1.7e-06,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|0.00037,PPR_3|PF13812.2|5.3e-06,PPR_3|PF13812.2|0.035,MRP-S27|PF10037.5|43,MRP-S27|PF10037.5|0.018,MRP-S27|PF10037.5|0.29,MRP-S27|PF10037.5|5.9e-05,ATP13|PF12921.3|5.6e+02,ATP13|PF12921.3|1.5,ATP13|PF12921.3|3.5e+02,ATP13|PF12921.3|4.7e+02,ATP13|PF12921.3|0.84 R_Transcript_186481:3-761(-)
ATGGATGAAGCATTAGAGTTAATGTATTTGATGGAAAAAGATGGTTGCCAACCTAACGTTGTGACTTTCACCACCATCATCAATGGGTATTGCAAGAGTAAGAACCTTGATGAAGCTTTCAGGCTATTCAAGGAAATGTCTTCTAGAGGATTGAGCCCCGATGTGAATACTTATAATACTCTTATAGACGGCTTGTCCAAGGGTACTAGGCTCCAACTTGCACTTCAACTCTTCAAAGAGATGCAAGCTCAGGGGATAACTCCAGATGTTGTCACCTATAATACTTTGGTGGATGGCCTATGTAAGGATGGACAACTTGATGAGGCTGTAACAATGTCTAAGGAGATGGAGAGGAATGGAGTGGTAAAGAACCTTGTGAGCTATAGTGTGTTAATTGATGGTATGTGTGAAAAGGGGAGATGGAAAGAGGCATCGGAAGTCTTCTCCAAGCTGATGGCCAAGGGATTGCAGCCAAATTGTATAACGTACACCGCAATGATAAAAGGACTTTGCAAGAAGGGGCTCTTAGATCAAGCTGATGAATTATTGAAGAAGATGGAGGAGCATGGCTGTTTTCCGAATGATCGTACCTACAATACCATTATTACTGGGTTCCTTTCCAACCACCAAATCACAAGAGGCCTGCAGCTTATTGAGATTATGACTAGCAGAGGTTTTGAAGCAGATGCTGAAACTTTGTCTGTATTCCTTGACTTGCTTTCAGATGACCGTGTAGACAATTCAGTCAAGGAGCAGCTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_186481.p1 GENE.R_Transcript_186481~~R_Transcript_186481.p1 ORF type:3prime_partial len:290 (-),score=59.76,PPR_2|PF13041.2|5.7e-05,PPR_2|PF13041.2|1e-18,PPR_2|PF13041.2|4.6e-22,PPR_2|PF13041.2|6.8e-19,PPR_2|PF13041.2|6.7e-18,PPR_2|PF13041.2|1.9e-16,PPR_2|PF13041.2|2.7e-16,PPR_2|PF13041.2|1.2e-06,PPR_1|PF12854.3|1.4e-09,PPR_1|PF12854.3|3.2e-17,PPR_1|PF12854.3|6.4e-10,PPR_1|PF12854.3|9.4e-15,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|3.6e-13,PPR_1|PF12854.3|0.00095,PPR|PF01535.16|2.2e-08,PPR|PF01535.16|6.3e-11,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|2e-08,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|4.7e-10,PPR|PF01535.16|0.019,PPR_3|PF13812.2|1.4e+04,PPR_3|PF13812.2|0.00022,PPR_3|PF13812.2|4.3e-07,PPR_3|PF13812.2|1.7e-06,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|0.00037,PPR_3|PF13812.2|5.3e-06,PPR_3|PF13812.2|0.035,MRP-S27|PF10037.5|43,MRP-S27|PF10037.5|0.018,MRP-S27|PF10037.5|0.29,MRP-S27|PF10037.5|5.9e-05,ATP13|PF12921.3|5.6e+02,ATP13|PF12921.3|1.5,ATP13|PF12921.3|3.5e+02,ATP13|PF12921.3|4.7e+02,ATP13|PF12921.3|0.84 R_Transcript_186481:3-761(-)
MDEALELMYLMEKDGCQPNVVTFTTIINGYCKSKNLDEAFRLFKEMSSRGLSPDVNTYNTLIDGLSKGTRLQLALQLFKEMQAQGITPDVVTYNTLVDGLCKDGQLDEAVTMSKEMERNGVVKNLVSYSVLIDGMCEKGRWKEASEVFSKLMAKGLQPNCITYTAMIKGLCKKGLLDQADELLKKMEEHGCFPNDRTYNTIITGFLSNHQITRGLQLIEIMTSRGFEADAETLSVFLDLLSDDRVDNSVKEQL

Click here to download the sequence:
Link to NCBI Protein BLAST