Transcript Information: R_Transcript_186483.p1


Annotated TAIR IDAT3G22470.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7966066-7967925 | Reverse length=619
E-Value1E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5789758611348
Replicate 20.58121246827123
Replicate 30.63409654245405
Condition 2: 8 Hour
Replicate 10.42363088144023
Replicate 20.77373293568116
Replicate 31.0049334599522
Condition 3: 24 Hour
Replicate 11.1915816900192
Replicate 21.2210523953261
Replicate 31.1360400356521


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_186483.p1 GENE.R_Transcript_186483~~R_Transcript_186483.p1 ORF type:internal len:289 (+),score=39.31,PPR_2|PF13041.2|2.8e-08,PPR_2|PF13041.2|2.3e-17,PPR_2|PF13041.2|5.1e-17,PPR_2|PF13041.2|1.6e-14,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|5.5e-07,PPR_2|PF13041.2|1.1e-16,PPR_2|PF13041.2|1.8e-15,PPR_1|PF12854.3|7.6,PPR_1|PF12854.3|5.7e-10,PPR_1|PF12854.3|1.3e-09,PPR_1|PF12854.3|1.1e-12,PPR_1|PF12854.3|2.1e-08,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|2.8e-07,PPR_1|PF12854.3|1.6e-11,PPR_1|PF12854.3|0.00076,PPR|PF01535.16|1,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|6.6e-07,PPR|PF01535.16|3.9e-07,PPR|PF01535.16|0.00097,PPR|PF01535.16|2.3e-05,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|3.8e-10,PPR|PF01535.16|1.6,PPR_3|PF13812.2|0.59,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.00056,PPR_3|PF13812.2|0.0047,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|1.8e-05,PPR_3|PF13812.2|7.2e+02,MRP-S27|PF10037.5|12,MRP-S27|PF10037.5|21,MRP-S27|PF10037.5|22,MRP-S27|PF10037.5|1.1e+02,MRP-S27|PF10037.5|71,MRP-S27|PF10037.5|0.15,MRP-S27|PF10037.5|18,ECSIT|PF06239.7|4.6,ECSIT|PF06239.7|1.3e+03,ECSIT|PF06239.7|2.5,ECSIT|PF06239.7|2.9,ECSIT|PF06239.7|22,TPR_19|PF14559.2|0.27,TPR_19|PF14559.2|3.4e+03,TPR_19|PF14559.2|1.1e+02,TPR_19|PF14559.2|7.2,TPR_19|PF14559.2|3.6e+02 R_Transcript_186483:1-864(+)
TGTAGTTTAGGCCGATGGGATGACGCTAAGGAAGCATTGACCGAGATGTTGGAGAGCAATGTAGCGCCAAACATCCATACTTATAGCATGTTAATTGACATGTATTGTAAAGAGGGGAAGGTTGGTGAAGCAAGATCCATACTTGACTTGATGACTAAGAGAGGTGAGAAGCCTAACATTGTTACCTACAATTCCCTTTTGGATGGATACTGTTTGACAGGCCAAATGGATAAAACCTCAGAGTTGATGGATCTGATGGCAAAACATGGGTGCCAGCCTGATCTTGTCAGCTTCAACACCGTTATCAATGGGTATTGCAAGAGTAATAACCTCGTCGAAGCTTTCAGGCTGCTCAATGAAACGCCTTCTAAAGGATTGAGCCCCGATATATTTACGTATAACACTTTTATAGCTGGCTCGTTCAAGGGTAATAGACTACCATGTGCACTTCAGCTTTTCAAACAGATGCGAGCTCAGGGGATAATTCCAAATGTTGTCACCTGTACTTCATTGGTAGATGGCCTTTCTAAAAAGGGCCAACTTGATGAGGCAGTAGCAATGTCTAAAAAGATGGAGAGTAATGGAGTGGTAAAGAATCTTGTGAGCTATAATGTGTTGATTGATGCTATGTGTGAAAAAGGGAACTGGAAAGAGGCAGCTCATGTCTTTTCCAAGCTCATAACCAAGGGACTGCAACCAGATCATATCACTTATAATGTAATGATAAAAGGACTTTCTAAGAAGGGGCTGTTAGATCAGGCTCATGAATTATTCAAGAAGATGGAGGAGCATGGCTGTTTTCCGGATCGTTGTTCCTACAATACACTCATTAGGGGTTTCCTTTGCAACAACCAAATCTCAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_186483.p1 GENE.R_Transcript_186483~~R_Transcript_186483.p1 ORF type:internal len:289 (+),score=39.31,PPR_2|PF13041.2|2.8e-08,PPR_2|PF13041.2|2.3e-17,PPR_2|PF13041.2|5.1e-17,PPR_2|PF13041.2|1.6e-14,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|5.5e-07,PPR_2|PF13041.2|1.1e-16,PPR_2|PF13041.2|1.8e-15,PPR_1|PF12854.3|7.6,PPR_1|PF12854.3|5.7e-10,PPR_1|PF12854.3|1.3e-09,PPR_1|PF12854.3|1.1e-12,PPR_1|PF12854.3|2.1e-08,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|2.8e-07,PPR_1|PF12854.3|1.6e-11,PPR_1|PF12854.3|0.00076,PPR|PF01535.16|1,PPR|PF01535.16|2.1e-07,PPR|PF01535.16|6.6e-07,PPR|PF01535.16|3.9e-07,PPR|PF01535.16|0.00097,PPR|PF01535.16|2.3e-05,PPR|PF01535.16|3.5e-06,PPR|PF01535.16|3.8e-10,PPR|PF01535.16|1.6,PPR_3|PF13812.2|0.59,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|0.00056,PPR_3|PF13812.2|0.0047,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|2.4,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|1.8e-05,PPR_3|PF13812.2|7.2e+02,MRP-S27|PF10037.5|12,MRP-S27|PF10037.5|21,MRP-S27|PF10037.5|22,MRP-S27|PF10037.5|1.1e+02,MRP-S27|PF10037.5|71,MRP-S27|PF10037.5|0.15,MRP-S27|PF10037.5|18,ECSIT|PF06239.7|4.6,ECSIT|PF06239.7|1.3e+03,ECSIT|PF06239.7|2.5,ECSIT|PF06239.7|2.9,ECSIT|PF06239.7|22,TPR_19|PF14559.2|0.27,TPR_19|PF14559.2|3.4e+03,TPR_19|PF14559.2|1.1e+02,TPR_19|PF14559.2|7.2,TPR_19|PF14559.2|3.6e+02 R_Transcript_186483:1-864(+)
CSLGRWDDAKEALTEMLESNVAPNIHTYSMLIDMYCKEGKVGEARSILDLMTKRGEKPNIVTYNSLLDGYCLTGQMDKTSELMDLMAKHGCQPDLVSFNTVINGYCKSNNLVEAFRLLNETPSKGLSPDIFTYNTFIAGSFKGNRLPCALQLFKQMRAQGIIPNVVTCTSLVDGLSKKGQLDEAVAMSKKMESNGVVKNLVSYNVLIDAMCEKGNWKEAAHVFSKLITKGLQPDHITYNVMIKGLSKKGLLDQAHELFKKMEEHGCFPDRCSYNTLIRGFLCNNQISK

Click here to download the sequence:
Link to NCBI Protein BLAST