Transcript Information: R_Transcript_186487.p1


Annotated TAIR IDAT1G12775.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:4353906-4355840 | Forward length=644
E-Value1E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11198135555042
Replicate 20
Replicate 30.8431927949504
Condition 2: 8 Hour
Replicate 10.1502200303512
Replicate 20.2743666483581
Replicate 30.44543829743281
Condition 3: 24 Hour
Replicate 10.42253632934425
Replicate 20
Replicate 30.93996277796492


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_186487.p1 GENE.R_Transcript_186487~~R_Transcript_186487.p1 ORF type:5prime_partial len:163 (+),score=24.46,PPR_2|PF13041.2|1.8e-10,PPR_2|PF13041.2|7.4e-17,PPR_2|PF13041.2|8.1e-17,PPR_2|PF13041.2|1e-18,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|3.8e-09,PPR_1|PF12854.3|1.8e-10,PPR_1|PF12854.3|1.5e-14,PPR_1|PF12854.3|1.2e-06,PPR|PF01535.16|0.00076,PPR|PF01535.16|6.8e-08,PPR|PF01535.16|2.5e-08,PPR|PF01535.16|8e-09,PPR|PF01535.16|0.73,PPR_3|PF13812.2|0.037,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|9.1e-05,PPR_3|PF13812.2|5.7e-05,PPR_3|PF13812.2|7.2,TPR_19|PF14559.2|0.002,TPR_19|PF14559.2|1.7e+02,TPR_19|PF14559.2|3.5e+02 R_Transcript_186487:2-490(+)
TCCTTACTTCGGGGTCTTTGTAGTTTAGGCCGATGGGATGAGGCTAAGGAAGCATTGACTAAGATGTTGGATAGCAATGTAGCACCAAATGTCCAAACTTATAGCATGCTGATTGACATATATTGCAAAGGCGGGAAGGTTGAGCAAGCAAAGTCCATACTCGACTTGATGATTGAGAGAGGTATGTGGCCTAACATTGTTACCTACAGTTCTCTTTTGGATGGATACTGTTTGACAGGCCAAATGGATAAAGCCTCAGAGTTGATGGATCTGATGGCAAAACATGGGTGCCAACCTGATCTTGTCAGCTTCAACACCGTCATCAATGGGTATTGCATGAGTAAGAACCTTGATGATGCTTTCAGGCTGTTCAAAGAAATGCATATCAAAAGATTGAACCCTAATGTAAATACATATAATACTCTTATAGACAGCTGGTGCAAGGGTAATTGGCTCCATTTATTTCCAACATGCACTTCAACTCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_186487.p1 GENE.R_Transcript_186487~~R_Transcript_186487.p1 ORF type:5prime_partial len:163 (+),score=24.46,PPR_2|PF13041.2|1.8e-10,PPR_2|PF13041.2|7.4e-17,PPR_2|PF13041.2|8.1e-17,PPR_2|PF13041.2|1e-18,PPR_1|PF12854.3|0.011,PPR_1|PF12854.3|3.8e-09,PPR_1|PF12854.3|1.8e-10,PPR_1|PF12854.3|1.5e-14,PPR_1|PF12854.3|1.2e-06,PPR|PF01535.16|0.00076,PPR|PF01535.16|6.8e-08,PPR|PF01535.16|2.5e-08,PPR|PF01535.16|8e-09,PPR|PF01535.16|0.73,PPR_3|PF13812.2|0.037,PPR_3|PF13812.2|0.00045,PPR_3|PF13812.2|9.1e-05,PPR_3|PF13812.2|5.7e-05,PPR_3|PF13812.2|7.2,TPR_19|PF14559.2|0.002,TPR_19|PF14559.2|1.7e+02,TPR_19|PF14559.2|3.5e+02 R_Transcript_186487:2-490(+)
SLLRGLCSLGRWDEAKEALTKMLDSNVAPNVQTYSMLIDIYCKGGKVEQAKSILDLMIERGMWPNIVTYSSLLDGYCLTGQMDKASELMDLMAKHGCQPDLVSFNTVINGYCMSKNLDDAFRLFKEMHIKRLNPNVNTYNTLIDSWCKGNWLHLFPTCTSTL*

Click here to download the sequence:
Link to NCBI Protein BLAST