Transcript Information: R_Transcript_18675.p2


Annotated TAIR IDAT2G40030.1
Annotated Gene Namenuclear RNA polymerase D1B
Annotated Gene Symbol(s)NRPD1B, DRD3, ATNRPD1B, DMS5, NRPE1
Annotation TypeHomolog
Chromosome Positionchr2:16715089-16723406 | Forward length=1976
E-Value4E-63
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6872484916127
Replicate 21.2350764950764
Replicate 32.4542933138735
Condition 2: 8 Hour
Replicate 12.5720446373157
Replicate 22.442785411222
Replicate 33.0506908605692
Condition 3: 24 Hour
Replicate 12.6044571224706
Replicate 21.3900373250364
Replicate 32.3910937893249


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_18675.p2 GENE.R_Transcript_18675~~R_Transcript_18675.p2 ORF type:3prime_partial len:476 (+),score=142.38,DUF3223|PF11523.4|1.1e-25 R_Transcript_18675:430-1854(+)
ATGGCTGGTGGGAATACAGAAAAGCGTGGTGAATGGAGACAACCAAGTGAAAAGCTCTGGGGGAAGTCTACTAAGAATGTTGGGGAGTGGAGTGCAAATAAGCCTAGTGAAGAGGAAGGTTCCAAAGGCTGGAGCCTCAAAAAGGATGAGCATAAAACTCATTCTTCTTGGGGACAAGCAAGTGGCACAGCCTGGAAAAACTCCCAACAAACCACTGACACATGGACTTCAGAGAAGGCCAATGATGCCGCAGGTAGCAAAAGTTGGGAGCCTAGAAAGGAAGAGGCTAAACTTCAGTCGTCATGGGGGCAACCTAATGAAACAGCCTGGAAGAATTCCAGTCAAACTGCTGGTGGCTGGAATACGAAAAGCGCTGGTGAACAGTCAGGTTCAGTCTGGGAGTCTAGTAAGGAAGAGGGTAAACCTCAGTCTTCATGGGGGAAGCCGAAGGAAACAGCCGGAAATAATTCCAATCAAAGTGCTGGTGGCTGGAATACCAAAAAGGCTAGTGAAGAGGCAGGCTCAGTCTGGGAGTCTAAAAAGGAAAAGGGTCAGACTCAATCTTCCTGGGGACGGACAATTGAGACAACCGGGAAGAAATCCAATAGTGGCTGGAGTACAGAGAAAGCCAATGATGAGACAGGCTCCAAAAACTGGGACTCCCAGAAGGAAGAGTGTAAAACTCCATCTTCATGGGGACAAGCAGGTGATTTGGCCTCAAAGGATAGACAAGGTACTGATGAATGGGGTTCTAAGAAGTCAAATTCACCTAGCAGTTCGCAAGCCTGGGGTTCTGGAAAGGGTGATACTGACAACAACAGTGAGAAGCAGGATACCTGGGGTTCTGGGAAGGGTGATACTGACAACAGCGAGAAGCAGGATGCCTGGGGGCAGCCAGGGAACTCAGGTTGGAAGAGAAAGCGACCTGAAGGAGGTCGTGGCTGGGGTTCCTCAAATTCTGGAGAGTGGAAAAGCAGGAAGAACCGCCCTCCTAAACAACCAGGACAAGCAAATGATGATTCTGCTGGTGTGGCATTTACTGCAACCAGAAAACGGATGGATTTGTTCACAACTGAGGAACAGGATGCCCTCTCTGAAATGGAAGCTATCATGCAATCAATCAGGAGGATTATGCATCAACCAGGGTTTAATGATGGTGACCCACTTCCTGATGATGATCAGTCATATATTGTCAACAATGTGTTGGATCACCATCCTGATAAAGCAGCTAAAATGGGAGCCGGAATTAAATATATCACTGTGAAAAAGCATAGCAGCTTCCAAGAAAGTCGTTGCTTTTATGTGGTGAAAACTGACGATCAGGCAGAGGACTTCTCTTACATCAAGTGTTTGGAGAACTTGGTAAAAGGGAAATACCCTTCTGTTGCAGAATCTTTTAATTCCAAGTATTTTAGAAGGCAACGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_18675.p2 GENE.R_Transcript_18675~~R_Transcript_18675.p2 ORF type:3prime_partial len:476 (+),score=142.38,DUF3223|PF11523.4|1.1e-25 R_Transcript_18675:430-1854(+)
MAGGNTEKRGEWRQPSEKLWGKSTKNVGEWSANKPSEEEGSKGWSLKKDEHKTHSSWGQASGTAWKNSQQTTDTWTSEKANDAAGSKSWEPRKEEAKLQSSWGQPNETAWKNSSQTAGGWNTKSAGEQSGSVWESSKEEGKPQSSWGKPKETAGNNSNQSAGGWNTKKASEEAGSVWESKKEKGQTQSSWGRTIETTGKKSNSGWSTEKANDETGSKNWDSQKEECKTPSSWGQAGDLASKDRQGTDEWGSKKSNSPSSSQAWGSGKGDTDNNSEKQDTWGSGKGDTDNSEKQDAWGQPGNSGWKRKRPEGGRGWGSSNSGEWKSRKNRPPKQPGQANDDSAGVAFTATRKRMDLFTTEEQDALSEMEAIMQSIRRIMHQPGFNDGDPLPDDDQSYIVNNVLDHHPDKAAKMGAGIKYITVKKHSSFQESRCFYVVKTDDQAEDFSYIKCLENLVKGKYPSVAESFNSKYFRRQR

Click here to download the sequence:
Link to NCBI Protein BLAST