Transcript Information: R_Transcript_186853.p1


Annotated TAIR IDAT2G39580.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Putative zinc-finger domain (InterPro:IPR019607); Has 249 Blast hits to 219 proteins in 85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi - 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16510540-16516948 | Forward length=1577
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22534519697184
Replicate 20.2592135853864
Replicate 30
Condition 2: 8 Hour
Replicate 10.30229462897834
Replicate 20.55212053928853
Replicate 30.67228187482915
Condition 3: 24 Hour
Replicate 10.85028915658163
Replicate 20.27228714679725
Replicate 30.27021857638145


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_186853.p1 GENE.R_Transcript_186853~~R_Transcript_186853.p1 ORF type:internal len:81 (+),score=20.18 R_Transcript_186853:3-242(+)
TCATCAATCCAAGATCGTGGAAGGAAAAGTGTGGATCTGAGCAGTAGCAAACTTCAGGACTTACGCCAACAGATTGCCATGCGTGAGAACGAAATGAAACGTAAAATAATGCAGAAAAATAAGGAAAATATCCCAGATGCTTGCAGAGATGTCAAAGTTATGGGCCAGAACAAACTGCCATCTAAGAAAAGCAGGGCACTTCCTTCTGATCTACATACCGAGCTTGAAGAGCCTGATAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_186853.p1 GENE.R_Transcript_186853~~R_Transcript_186853.p1 ORF type:internal len:81 (+),score=20.18 R_Transcript_186853:3-242(+)
SSIQDRGRKSVDLSSSKLQDLRQQIAMRENEMKRKIMQKNKENIPDACRDVKVMGQNKLPSKKSRALPSDLHTELEEPDR

Click here to download the sequence:
Link to NCBI Protein BLAST