Transcript Information: R_Transcript_186997.p1


Annotated TAIR IDAT4G27610.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27620.2); Has 1304 Blast hits to 1173 proteins in 200 species: Archae - 14; Bacteria - 115; Metazoa - 628; Fungi - 104; Plants - 95; Viruses - 8; Other Eukaryotes - 340 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13785648-13787332 | Reverse length=334
E-Value7.6E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.128878315279
Replicate 216.316773050789
Replicate 315.853343321677
Condition 2: 8 Hour
Replicate 114.504823223881
Replicate 216.262459520862
Replicate 317.033769497137
Condition 3: 24 Hour
Replicate 121.005383739131
Replicate 213.711773855726
Replicate 315.533209777798


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_186997.p1 GENE.R_Transcript_186997~~R_Transcript_186997.p1 ORF type:complete len:341 (+),score=74.75,Filament|PF00038.17|0.12,Filament|PF00038.17|3.9e+02,Filament|PF00038.17|0.00022 R_Transcript_186997:424-1446(+)
ATGAAATCGAGAAACAATTATGGTCAGAGATTGAGGAGTAGTAGTAGTTGTCAAGGTCAAGGGGGAGAGGGGCCAAATTGGGTGCTGGTAGTAGGAGGGGCTTTGTTGAGTACATTATCGATTCGGTTAGGGTTTAAGTTGAAACACGCGCTTGAGTGGAAACAGCGCGATACTAGTAACAATTCCGTCTTAAAAGGTGGTGAGAGATCTGCTGATAGGAATGGTTTGGCAAATTGTCGCTCACATTCGAGTTTGCACTCATTTGGATTGGATGAAAAAACTTGCTTCAATTGTGCTTCTGGAGAGCGTATGGTGGAGATTAAGAACCCTCCAAATGGTCAAAATTTGACAGAACCTGAGATCTCTCTTCCCTTAGTGACTGTTCCTCCCCCTGAATATGGCATGGTTTGGGTGACTTCCCCAGAGCGTGGTGATCCACCTCCAAAGCCGTTCCAGCAGTCAAGTAATTCAGACTCACCATGTGTCTCTGAGTCAGGTTCTGACATCTTTAGCAAGAGAGAAGTAATACAAAAGCTCAGGCAACAGTTGAAAAGAAGAGATGACATGATATTGGAGATGCAGGATCAGATCACTGAGCTGCGGAATGCGTTCAATGCCCAGATGTCTCATTCGAATCATTTACAGTCGCAGCTTGATTCAGTGCACAGGGAGCTCTTTGACTCGGAGAGGGAAATTCAGAGATTGAGGAAGGCTATTGCAGATCATTGTGTGGCACATACGGACCCAAATGAGAAGGTCTCTAACACTTTTGGTTGGCCATCAGAGGGGAGAAATGGTCATGCCAATGGCTTTCTTAATGGGGATACCAGTTTTGAACCTTCCGAGAAGAGCAAAGGAGATGAAAGAATTGAGATGCTGAAGAAGGAAATAGGAGAGCTGAGAGAAGTAATCGAAGGAAAAGAGTTCCTGTTGCAGAGCTACAAGGAGCAGAAGGCCGAGCTTGCCTCTAAGATCAAGGAGTTGCAACAAAGACTAGATTCTCAACTTCCACATATATTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_186997.p1 GENE.R_Transcript_186997~~R_Transcript_186997.p1 ORF type:complete len:341 (+),score=74.75,Filament|PF00038.17|0.12,Filament|PF00038.17|3.9e+02,Filament|PF00038.17|0.00022 R_Transcript_186997:424-1446(+)
MKSRNNYGQRLRSSSSCQGQGGEGPNWVLVVGGALLSTLSIRLGFKLKHALEWKQRDTSNNSVLKGGERSADRNGLANCRSHSSLHSFGLDEKTCFNCASGERMVEIKNPPNGQNLTEPEISLPLVTVPPPEYGMVWVTSPERGDPPPKPFQQSSNSDSPCVSESGSDIFSKREVIQKLRQQLKRRDDMILEMQDQITELRNAFNAQMSHSNHLQSQLDSVHRELFDSEREIQRLRKAIADHCVAHTDPNEKVSNTFGWPSEGRNGHANGFLNGDTSFEPSEKSKGDERIEMLKKEIGELREVIEGKEFLLQSYKEQKAELASKIKELQQRLDSQLPHIL*

Click here to download the sequence:
Link to NCBI Protein BLAST